RNA–Protein interactions for RNA: ENST00000307972.8

FOXP4-201, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-201ENST00000307972 TMEM139Q8IV31 216 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 RHOXF2BP0C7M4 288 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 CEP112Q8N8E3 955 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 RHOXF2Q9BQY4 288 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 CEP131Q9UPN4 1083 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 UBN2Q6ZU65 1347 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 WDR19Q8NEZ3 1342 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 ZNF532Q9HCE3 1301 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 CCDC151A5D8V7 595 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
FOXP4-201ENST00000307972 CMTR1Q8N1G2 835 aaKnown RBP13.36□□□□□ -0.27
FOXP4-201ENST00000307972 MRPL44Q9H9J2 332 aaKnown RBP13.36□□□□□ -0.27
FOXP4-201ENST00000307972 USP54Q70EL1 1684 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 ADD2P35612 726 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 MCAMP43121 646 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 GRIN1Q05586 938 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 CTDSPL2Q05D32 466 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 BRD3Q15059 726 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 KIF6Q6ZMV9 814 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 SRGAP1Q7Z6B7 1085 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
FOXP4-201ENST00000307972 ADAM21Q9UKJ8 722 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 C5P01031 1676 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 RANBP6O60518 1105 aaKnown RBP13.35□□□□□ -0.27
FOXP4-201ENST00000307972 GPTP24298 496 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 RTN1Q16799 776 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 CTAGE9A4FU28 777 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 PES1O00541 588 aaKnown RBP13.35□□□□□ -0.27
FOXP4-201ENST00000307972 TDO2P48775 406 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 C10orf67Q8IYJ2 551 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 FUT8Q9BYC5 575 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 PDE11AQ9HCR9 933 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 CABP5Q9NP86 173 aa13.35□□□□□ -0.27
FOXP4-201ENST00000307972 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 TEX33O43247 280 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 CAPN2P17655 700 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 TBX2Q13207 712 aaPredicted RBP13.34□□□□□ -0.27
FOXP4-201ENST00000307972 NR5A1Q13285 461 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 RSRC2Q7L4I2 434 aaKnown RBP13.34□□□□□ -0.27
FOXP4-201ENST00000307972 RBL2Q08999 1139 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 MFSD6Q6ZSS7 791 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 HDXQ7Z353 690 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 GOLGA6L1Q8N7Z2 621 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 PCDHB6Q9Y5E3 794 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 MEGF6O75095 1541 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 PHACTR2O75167 634 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 PLCD1P51178 756 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 WTAPQ15007 396 aa13.34□□□□□ -0.27
FOXP4-201ENST00000307972 SYNRGQ9UMZ2 1314 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 MMP1P03956 469 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 PTPREP23469 700 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 TRIML1Q8N9V2 468 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 LY9Q9HBG7 655 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 ZSWIM5Q9P217 1185 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CDC23Q9UJX2 597 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 PDE6AP16499 860 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 GUCY1A2P33402 732 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CCT6AP40227 531 aaKnown RBP13.33□□□□□ -0.28
FOXP4-201ENST00000307972 TCIRG1Q13488 830 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 ANKRD20A12PQ8NF67 263 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 FAM237AA0A1B0GTK4 181 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 ANKRD18BA2A2Z9 1011 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CTAGE15A4D2H0 777 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 FMNL1O95466 1100 aaPredicted RBP13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CTAGE8P0CG41 777 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 XBP1P17861 261 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 MORC3Q14149 939 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 TOM1L2Q6ZVM7 507 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CTAGE6Q86UF2 777 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CTAGE4Q8IX94 777 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 IGDCC4Q8TDY8 1250 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.28
FOXP4-201ENST00000307972 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CSRNP2Q9H175 543 aa13.33□□□□□ -0.28
FOXP4-201ENST00000307972 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
FOXP4-201ENST00000307972 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 ZNF18P17022 549 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 ITGA6P23229 1130 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 NTRK3Q16288 839 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 NKX2-3Q8TAU0 364 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 EXOC4Q96A65 974 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 ACBD3Q9H3P7 528 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 RNF216Q9NWF9 866 aaPredicted RBP13.32□□□□□ -0.28
FOXP4-201ENST00000307972 FBXO3Q9UK99 471 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 ADGRG1Q9Y653 693 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 N4BP3O15049 544 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 MBD4O95243 580 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 CASP14P31944 242 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 NR1I3Q14994 352 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 USP49Q70CQ1 688 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
FOXP4-201ENST00000307972 PANX2Q96RD6 677 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 UBAC1Q9BSL1 405 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 FBXO2Q9UK22 296 aaPredicted RBP13.32□□□□□ -0.28
FOXP4-201ENST00000307972 WWC3Q9ULE0 1092 aa13.32□□□□□ -0.28
FOXP4-201ENST00000307972 ERCC5P28715 1186 aaPredicted RBP13.31□□□□□ -0.28
FOXP4-201ENST00000307972 CASP1P29466 404 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms