RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAM204AQ9H8W3 233 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 PTPN23Q9H3S7 1636 aa14.1□□□□□ -0.15
USP38-201ENST00000307017 ARHGAP42A6NI28 874 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 ZFYP08048 801 aaPredicted RBP14.09□□□□□ -0.15
USP38-201ENST00000307017 AMOTQ4VCS5 1084 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 C4orf50Q6ZRC1 276 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 GCNT3O95395 438 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 SNRPA1P09661 255 aaKnown RBP14.09□□□□□ -0.15
USP38-201ENST00000307017 SV2BQ7L1I2 683 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 PPFIBP2Q8ND30 876 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 BCL2L12Q9HB09 334 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 FIS1Q9Y3D6 152 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 KRT15P19012 456 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 ZNF75DP51815 510 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 TTC14Q96N46 770 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 TACC3Q9Y6A5 838 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 FRMPD2Q68DX3 1309 aaPredicted RBP14.09□□□□□ -0.15
USP38-201ENST00000307017 ABL1P00519 1130 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 EPB41P11171 864 aaKnown RBP14.09□□□□□ -0.15
USP38-201ENST00000307017 C8orf37Q96NL8 207 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 FNBP1Q96RU3 617 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 ABCF3Q9NUQ8 709 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 MICAL1Q8TDZ2 1067 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 E2F5Q15329 346 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 ERCC6LQ2NKX8 1250 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 FYB2Q5VWT5 728 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 CSGALNACT2Q8N6G5 542 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 NELFBQ8WX92 580 aa14.09□□□□□ -0.15
USP38-201ENST00000307017 GMNNO75496 209 aa14.08□□□□□ -0.15
USP38-201ENST00000307017 MYL5Q02045 173 aa14.08□□□□□ -0.15
USP38-201ENST00000307017 HHATQ5VTY9 493 aa14.08□□□□□ -0.15
USP38-201ENST00000307017 CCDC105Q8IYK2 499 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 THOC1Q96FV9 657 aaKnown RBP14.08□□□□□ -0.16
USP38-201ENST00000307017 EHBP1L1Q8N3D4 1523 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 MARCH10Q8NA82 808 aaPredicted RBP14.08□□□□□ -0.16
USP38-201ENST00000307017 TSGA10Q9BZW7 698 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 ANLNQ9NQW6 1124 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 CFAP65Q6ZU64 1925 aaKnown RBP14.08□□□□□ -0.16
USP38-201ENST00000307017 BICDL2A1A5D9 508 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 ATP8B2P98198 1209 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 IFNL2Q8IZJ0 200 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 PCF11O94913 1555 aaKnown RBP14.08□□□□□ -0.16
USP38-201ENST00000307017 TIAM1Q13009 1591 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 GNGT1P63211 74 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 VPS54Q9P1Q0 977 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 BIN2Q9UBW5 565 aaPredicted RBP14.08□□□□□ -0.16
USP38-201ENST00000307017 NESP48681 1621 aa14.08□□□□□ -0.16
USP38-201ENST00000307017 CYP26C1Q6V0L0 522 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 CCDC26Q8TAB7 109 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 PHACTR3Q96KR7 559 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 RBM28Q9NW13 759 aaKnown RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 ENC1O14682 589 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 PARP1P09874 1014 aaKnown RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 ATP2A2P16615 1042 aaKnown RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 MUM1Q2TAK8 710 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 RRAGAQ7L523 313 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 NRBP1Q9UHY1 535 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 SNX14Q9Y5W7 946 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 CLTAP09496 248 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 CPXCR1Q8N123 301 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 IRS4O14654 1257 aaPredicted RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 NR1I2O75469 434 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 GCKP35557 465 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 SECISBP2LQ93073 1101 aaKnown RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 CTTNBP2NLQ9P2B4 639 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 ELP1O95163 1332 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 SLC4A1P02730 911 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 RPS6KB1P23443 525 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 TSTA3Q13630 321 aaPredicted RBP14.07□□□□□ -0.16
USP38-201ENST00000307017 KCNH3Q9ULD8 1083 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 SMIM24O75264 130 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 PPP4R4Q6NUP7 873 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 NUF2Q9BZD4 464 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 LRRC27Q9C0I9 530 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 EFCC1Q9HA90 598 aa14.07□□□□□ -0.16
USP38-201ENST00000307017 GYS2P54840 703 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 CLUL1Q15846 466 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 MTUS1Q9ULD2 1270 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 ZNF202O95125 648 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 SLC12A1Q13621 1099 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 MYCT1Q8N699 235 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 SUDS3Q9H7L9 328 aaPredicted RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 SMYD2Q9NRG4 433 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 COG7P83436 770 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 SCYL2Q6P3W7 929 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 ANKRD44Q8N8A2 993 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 ZNF853P0CG23 659 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 HDAC1Q13547 482 aaPredicted RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 SMAP1Q8IYB5 467 aaPredicted RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 CASQ2O14958 399 aaPredicted RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 LSM14BQ9BX40 385 aaKnown RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 CNNM2Q9H8M5 875 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 MKRN1Q9UHC7 482 aaKnown RBP14.06□□□□□ -0.16
USP38-201ENST00000307017 RABGAP1Q9Y3P9 1069 aa14.06□□□□□ -0.16
USP38-201ENST00000307017 LONRF2Q1L5Z9 754 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 ERO1AQ96HE7 468 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 CYP2J2P51589 502 aa14.05□□□□□ -0.16
USP38-201ENST00000307017 GSTO1P78417 241 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms