RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 BAIAP2L1Q9UHR4 511 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 TTF2Q9UNY4 1162 aaKnown RBP11.53□□□□□ -0.56
CLIP1-201ENST00000302528 STK38LQ9Y2H1 464 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 RNF40O75150 1001 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 TMTC4Q5T4D3 741 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 CNNM4Q6P4Q7 775 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 MORC4Q8TE76 937 aa11.53□□□□□ -0.56
CLIP1-201ENST00000302528 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 CTAGE3PQ8IX95 158 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 MIGA1Q8NAN2 632 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 SECISBP2LQ93073 1101 aaKnown RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 TACO1Q9BSH4 297 aaKnown RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 RBM28Q9NW13 759 aaKnown RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 FAF1Q9UNN5 650 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 SDSP20132 328 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 IL15P40933 162 aaPredicted RBP11.52□□□□□ -0.56
CLIP1-201ENST00000302528 TUBB2AQ13885 445 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 ZNF174Q15697 407 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 CHST3Q7LGC8 479 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 WAPLQ7Z5K2 1190 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 CHMP6Q96FZ7 201 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 TUBB2BQ9BVA1 445 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 CARD10Q9BWT7 1032 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.56
CLIP1-201ENST00000302528 GOLGA6BA6NDN3 693 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 KRT19P08727 400 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 HAUS3Q68CZ6 603 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 ERO1AQ96HE7 468 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 MRPL46Q9H2W6 279 aaKnown RBP11.52□□□□□ -0.57
CLIP1-201ENST00000302528 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 FAN1Q9Y2M0 1017 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 DKC1O60832 514 aaKnown RBP eCLIP11.52□□□□□ -0.57
CLIP1-201ENST00000302528 SH3BGRP55822 239 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-201ENST00000302528 APOBRQ0VD83 1088 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 FCHSD1Q86WN1 690 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 Q9H521 79 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 LAMC3Q9Y6N6 1575 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 ARHGEF35A5YM69 484 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 DNAJC8O75937 253 aaPredicted RBP11.52□□□□□ -0.57
CLIP1-201ENST00000302528 GSTA1P08263 222 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 GSTA2P09210 222 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 MGARPQ8TDB4 240 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 TMOD4Q9NZQ9 345 aa11.52□□□□□ -0.57
CLIP1-201ENST00000302528 ATP6V1AP38606 617 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 MTMR3Q13615 1198 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 LCA5Q86VQ0 697 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 ANKRD42Q8N9B4 389 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 P3H4Q92791 437 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 TBC1D32Q96NH3 1257 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 ESYT1Q9BSJ8 1104 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 CTTNBP2Q8WZ74 1663 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 PTPDC1A2A3K4 754 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 ANXA1P04083 346 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 IL1RL1Q01638 556 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 PAK2Q13177 524 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 PDCD2Q16342 344 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-201ENST00000302528 BANK1Q8NDB2 785 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 MICAL1Q8TDZ2 1067 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 NIP7Q9Y221 180 aaKnown RBP eCLIP11.51□□□□□ -0.57
CLIP1-201ENST00000302528 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
CLIP1-201ENST00000302528 BAG2O95816 211 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 OATP04181 439 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 STX2P32856 288 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 ARHGAP4P98171 946 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 RAB3GAP1Q15042 981 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 MAGEB6Q8N7X4 407 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 ELP1O95163 1332 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
CLIP1-201ENST00000302528 NMIQ13287 307 aaPredicted RBP11.51□□□□□ -0.57
CLIP1-201ENST00000302528 M0QZ92 97 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 RXRAP19793 462 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 ZBTB17Q13105 803 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 BEND3Q5T5X7 828 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 C4orf50Q6ZRC1 276 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 NOP9Q86U38 636 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 ZRANB1Q9UGI0 708 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 LDHBP07195 334 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 PRIM1P49642 420 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 DENND2CQ68D51 928 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 LMBR1LQ6UX01 489 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 NSFL1CQ9UNZ2 370 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 POLD1P28340 1107 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 TRIM68Q6AZZ1 485 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 PALM2Q8IXS6 379 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 SYCE1Q8N0S2 351 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 MAIP1Q8WWC4 291 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 POMGNT1Q8WZA1 660 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 EYA3Q99504 573 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 NYXQ9GZU5 481 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 PICK1Q9NRD5 415 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 LRPPRCP42704 1394 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 RNF113AO15541 343 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 PRPF6O94906 941 aaKnown RBP11.5□□□□□ -0.57
CLIP1-201ENST00000302528 MAEAQ7L5Y9 396 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 CSGALNACT2Q8N6G5 542 aa11.5□□□□□ -0.57
CLIP1-201ENST00000302528 TRIM56Q9BRZ2 755 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms