RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 ALDH1A1P00352 501 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 PTPRAP18433 802 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 CYP7A1P22680 504 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 GTF2A2P52657 109 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 EVX2Q03828 476 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 SHROOM1Q2M3G4 852 aaPredicted RBP13.73□□□□□ -0.21
CLCC1-201ENST00000302500 TEX11Q8IYF3 940 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 PI4K2BQ8TCG2 481 aa13.73□□□□□ -0.21
CLCC1-201ENST00000302500 OTUD7AQ8TE49 926 aaPredicted RBP13.73□□□□□ -0.21
CLCC1-201ENST00000302500 YTHDC1Q96MU7 727 aaKnown RBP13.73□□□□□ -0.21
CLCC1-201ENST00000302500 CCL15-CCL14A0A0B4J2E2 113 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-201ENST00000302500 CTNND1O60716 968 aaKnown RBP13.72□□□□□ -0.21
CLCC1-201ENST00000302500 IDH1O75874 414 aaKnown RBP13.72□□□□□ -0.21
CLCC1-201ENST00000302500 ADD2P35612 726 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 GABPAQ06546 454 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 HDAC1Q13547 482 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-201ENST00000302500 CCL15Q16663 113 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
CLCC1-201ENST00000302500 TGFBRAP1Q8WUH2 860 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 RLFQ13129 1914 aa13.72□□□□□ -0.21
CLCC1-201ENST00000302500 ZNF532Q9HCE3 1301 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 GOLIM4O00461 696 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 IFIT2P09913 472 aaKnown RBP13.71□□□□□ -0.21
CLCC1-201ENST00000302500 MAPKAPK5Q8IW41 473 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 MIGA1Q8NAN2 632 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 DHX36Q9H2U1 1008 aaKnown RBP13.71□□□□□ -0.21
CLCC1-201ENST00000302500 BOLA2Q9H3K6 86 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 PAG1Q9NWQ8 432 aa13.71□□□□□ -0.21
CLCC1-201ENST00000302500 MYH8P13535 1937 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 CXCL11O14625 94 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 BAG3O95817 575 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 PLCG2P16885 1265 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 CTGFP29279 349 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 CAP2P40123 477 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 MAP3K12Q12852 859 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 SNAPC2Q13487 334 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 TTF1Q15361 905 aaPredicted RBP13.7□□□□□ -0.22
CLCC1-201ENST00000302500 TATDN1Q6P1N9 297 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 CCDC84Q86UT8 332 aaPredicted RBP13.7□□□□□ -0.22
CLCC1-201ENST00000302500 EHD4Q9H223 541 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 PI4KBQ9UBF8 816 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 HERC5Q9UII4 1024 aaKnown RBP13.7□□□□□ -0.22
CLCC1-201ENST00000302500 PALD1Q9ULE6 856 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 PARP14Q460N5 1801 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 DOCK3Q8IZD9 2030 aa13.7□□□□□ -0.22
CLCC1-201ENST00000302500 SMIM22K7EJ46 135 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 CETPP11597 493 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 SLC9C2Q5TAH2 1124 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 TSHZ3Q63HK5 1081 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 C17orf99Q6UX52 265 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 CTU1Q7Z7A3 348 aaKnown RBP13.69□□□□□ -0.22
CLCC1-201ENST00000302500 ANKRD23Q86SG2 305 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 LCORLQ8N3X6 602 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 ECHDC1Q9NTX5 307 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 PLXNB2O15031 1838 aa13.69□□□□□ -0.22
CLCC1-201ENST00000302500 TLR2O60603 784 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 FKTNO75072 461 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 PLCD1P51178 756 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 DGKZQ13574 1117 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 UBE3CQ15386 1083 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 SH3D19Q5HYK7 790 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 CERS3Q8IU89 383 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 SMC5Q8IY18 1101 aa13.68□□□□□ -0.22
CLCC1-201ENST00000302500 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
CLCC1-201ENST00000302500 SHMT1P34896 483 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 RGS19P49795 217 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 POTEEQ6S8J3 1075 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 OTOP1Q7RTM1 612 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
CLCC1-201ENST00000302500 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.67□□□□□ -0.222e-6■■■□□ 17.1
CLCC1-201ENST00000302500 DCP1AQ9NPI6 582 aaPredicted RBP13.67□□□□□ -0.22
CLCC1-201ENST00000302500 ZHX2Q9Y6X8 837 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
CLCC1-201ENST00000302500 FOXP2O15409 715 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 IGHDP01880 384 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 BCRP11274 1271 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 GUCY1A2P33402 732 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 AAMPQ13685 434 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
CLCC1-201ENST00000302500 KBTBD3Q8NAB2 608 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 WDR18Q9BV38 432 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 PUS7LQ9H0K6 701 aaKnown RBP13.66□□□□□ -0.22
CLCC1-201ENST00000302500 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 SLC45A1Q9Y2W3 748 aa13.66□□□□□ -0.22
CLCC1-201ENST00000302500 MAGEB6P1A0A0J9YX57 407 aa13.65□□□□□ -0.22
CLCC1-201ENST00000302500 PRKAB2O43741 272 aa13.65□□□□□ -0.22
CLCC1-201ENST00000302500 EXOC6Q8TAG9 804 aa13.65□□□□□ -0.22
CLCC1-201ENST00000302500 SDR42E1Q8WUS8 393 aa13.65□□□□□ -0.22
CLCC1-201ENST00000302500 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
CLCC1-201ENST00000302500 SAP30BPQ9UHR5 308 aaKnown RBP13.65□□□□□ -0.22
CLCC1-201ENST00000302500 PDHXO00330 501 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 SP3Q02447 781 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 TAF1CQ15572 869 aaPredicted RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 PKN2Q16513 984 aaKnown RBP13.64□□□□□ -0.23
CLCC1-201ENST00000302500 TREML2Q5T2D2 321 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 CD99L2Q8TCZ2 262 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
CLCC1-201ENST00000302500 ARHGAP39Q9C0H5 1083 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms