RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 GAKO14976 1311 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 NID2Q14112 1375 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 LAMB1P07942 1786 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 CDKL5O76039 1030 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 OTUD7BQ6GQQ9 843 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 TTC6Q86TZ1 520 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 CERS3Q8IU89 383 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 SLF2Q8IX21 1173 aa26.03■■□□□ 1.76
SMAD1-201ENST00000302085 ENAHQ8N8S7 591 aaPredicted RBP26.03■■□□□ 1.76
SMAD1-201ENST00000302085 ZNF219Q9P2Y4 722 aaPredicted RBP26.03■■□□□ 1.76
SMAD1-201ENST00000302085 FBXW7Q969H0 707 aa26.02■■□□□ 1.76
SMAD1-201ENST00000302085 C8orf76Q96K31 380 aa26.02■■□□□ 1.76
SMAD1-201ENST00000302085 RHBDL3P58872 404 aa26.02■■□□□ 1.76
SMAD1-201ENST00000302085 SLC4A8Q2Y0W8 1093 aa26.02■■□□□ 1.76
SMAD1-201ENST00000302085 CPLX2Q6PUV4 134 aaKnown RBP26.02■■□□□ 1.76
SMAD1-201ENST00000302085 SUGT1Q9Y2Z0 365 aa26.02■■□□□ 1.76
SMAD1-201ENST00000302085 ZNF445P59923 1031 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 MAPKAPK5Q8IW41 473 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 ZNF654Q8IZM8 581 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 FBXO18Q8NFZ0 1043 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 PHKBQ93100 1093 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 MXD3Q9BW11 206 aa26.01■■□□□ 1.75
SMAD1-201ENST00000302085 G3V3G9 751 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 PDE4BQ07343 736 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 DCAF8Q5TAQ9 597 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 PLCG2P16885 1265 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 RCAN1P53805 252 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 FAM47AQ5JRC9 791 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 IQCA1Q86XH1 822 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 TEX11Q8IYF3 940 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 SCAND2PQ9GZW5 306 aaPredicted RBP26■■□□□ 1.75
SMAD1-201ENST00000302085 GJB4Q9NTQ9 266 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 DAGLAQ9Y4D2 1042 aa26■■□□□ 1.75
SMAD1-201ENST00000302085 ELP1O95163 1332 aa25.99■■□□□ 1.75
SMAD1-201ENST00000302085 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
SMAD1-201ENST00000302085 RTN1Q16799 776 aa25.99■■□□□ 1.75
SMAD1-201ENST00000302085 L1TD1Q5T7N2 865 aaKnown RBP25.99■■□□□ 1.75
SMAD1-201ENST00000302085 ILDR1Q86SU0 546 aaPredicted RBP25.99■■□□□ 1.75
SMAD1-201ENST00000302085 FANCBQ8NB91 859 aa25.99■■□□□ 1.75
SMAD1-201ENST00000302085 DYNLL2Q96FJ2 89 aa25.99■■□□□ 1.75
SMAD1-201ENST00000302085 TPRNQ4KMQ1 711 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 LEO1Q8WVC0 666 aaPredicted RBP25.98■■□□□ 1.75
SMAD1-201ENST00000302085 AIFM3Q96NN9 605 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 DBNDD1Q9H9R9 158 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 KCNQ5Q9NR82 932 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 SAP30BPQ9UHR5 308 aaKnown RBP25.98■■□□□ 1.75
SMAD1-201ENST00000302085 ISY1Q9ULR0 285 aaKnown RBP25.98■■□□□ 1.75
SMAD1-201ENST00000302085 F8W031 263 aaPredicted RBP25.98■■□□□ 1.75
SMAD1-201ENST00000302085 IFNAR1P17181 557 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 PODNQ7Z5L7 613 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 RGS22Q8NE09 1264 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 SPATA32Q96LK8 384 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 ALG1Q9BT22 464 aa25.98■■□□□ 1.75
SMAD1-201ENST00000302085 NMT2O60551 498 aa25.97■■□□□ 1.75
SMAD1-201ENST00000302085 PLCD1P51178 756 aa25.97■■□□□ 1.75
SMAD1-201ENST00000302085 IFIT1BQ5T764 474 aaKnown RBP25.97■■□□□ 1.75
SMAD1-201ENST00000302085 NUP133Q8WUM0 1156 aa25.97■■□□□ 1.75
SMAD1-201ENST00000302085 ROBO3Q96MS0 1386 aa25.97■■□□□ 1.75
SMAD1-201ENST00000302085 CDK5RAP2Q96SN8 1893 aa25.97■■□□□ 1.75
SMAD1-201ENST00000302085 FMNL1O95466 1100 aaPredicted RBP25.96■■□□□ 1.75
SMAD1-201ENST00000302085 SSRP1Q08945 709 aaKnown RBP25.96■■□□□ 1.75
SMAD1-201ENST00000302085 TTF2Q9UNY4 1162 aaKnown RBP25.96■■□□□ 1.75
SMAD1-201ENST00000302085 POLR3DP05423 398 aaPredicted RBP25.96■■□□□ 1.75
SMAD1-201ENST00000302085 AMOTL1Q8IY63 956 aa25.96■■□□□ 1.75
SMAD1-201ENST00000302085 STK36Q9NRP7 1315 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 NAV1Q8NEY1 1877 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 C10orf71Q711Q0 1435 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 UBE2Q2LH0YL09 131 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 NBPF11Q86T75 865 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 SLC26A6Q9BXS9 759 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 CFAP45Q9UL16 551 aa25.95■■□□□ 1.75
SMAD1-201ENST00000302085 FLT1P17948 1338 aa25.95■■□□□ 1.74
SMAD1-201ENST00000302085 CCDC196A0A1B0GTZ2 297 aa25.95■■□□□ 1.74
SMAD1-201ENST00000302085 XRCC6P12956 609 aaKnown RBP eCLIP25.95■■□□□ 1.74
SMAD1-201ENST00000302085 SLC16A10Q8TF71 515 aa25.95■■□□□ 1.74
SMAD1-201ENST00000302085 SNED1Q8TER0 1413 aa25.94■■□□□ 1.74
SMAD1-201ENST00000302085 DLEC1Q9Y238 1755 aa25.94■■□□□ 1.74
SMAD1-201ENST00000302085 TSPY2A6NKD2 308 aa25.94■■□□□ 1.74
SMAD1-201ENST00000302085 TFAP4Q01664 338 aa25.94■■□□□ 1.74
SMAD1-201ENST00000302085 CRACR2BQ8N4Y2 399 aaPredicted RBP25.94■■□□□ 1.74
SMAD1-201ENST00000302085 SYAP1Q96A49 352 aaPredicted RBP25.94■■□□□ 1.74
SMAD1-201ENST00000302085 CATIPQ7Z7H3 387 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 MRE11P49959 708 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 SCNN1DP51172 638 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 TROAPQ12815 778 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 PPP2R5BQ15173 497 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 KRT40Q6A162 431 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 ATL3Q6DD88 541 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 CC2D2BQ6DHV5 1058 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 CMTR1Q8N1G2 835 aaKnown RBP25.93■■□□□ 1.74
SMAD1-201ENST00000302085 GRPEL1Q9HAV7 217 aa25.93■■□□□ 1.74
SMAD1-201ENST00000302085 MYH15Q9Y2K3 1946 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 SYCE3A1L190 88 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 ECE2O60344 883 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 NT5C2P49902 561 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 RCSD1Q6JBY9 416 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 SLC44A5Q8NCS7 719 aa25.92■■□□□ 1.74
SMAD1-201ENST00000302085 ZNF396Q96N95 335 aaPredicted RBP25.92■■□□□ 1.74
SMAD1-201ENST00000302085 FTOQ9C0B1 505 aaKnown RBP eCLIP25.92■■□□□ 1.74
SMAD1-201ENST00000302085 MKNK2Q9HBH9 465 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms