RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
SMG8-201ENST00000300917 C11orf57Q6ZUT1 292 aaPredicted RBP16.89■□□□□ 0.29
SMG8-201ENST00000300917 TRIM22Q8IYM9 498 aa16.89■□□□□ 0.29
SMG8-201ENST00000300917 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
SMG8-201ENST00000300917 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
SMG8-201ENST00000300917 DDR1Q08345 913 aa16.89■□□□□ 0.29
SMG8-201ENST00000300917 OXER1Q8TDS5 423 aa16.89■□□□□ 0.29
SMG8-201ENST00000300917 VPS54Q9P1Q0 977 aa16.89■□□□□ 0.29
SMG8-201ENST00000300917 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMG8-201ENST00000300917 SLC44A5Q8NCS7 719 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 SH3RF3Q8TEJ3 882 aaPredicted RBP16.88■□□□□ 0.29
SMG8-201ENST00000300917 ZSCAN10Q96SZ4 725 aaPredicted RBP16.88■□□□□ 0.29
SMG8-201ENST00000300917 ZNF219Q9P2Y4 722 aaPredicted RBP16.88■□□□□ 0.29
SMG8-201ENST00000300917 CCDC39Q9UFE4 941 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 ST5P78524 1137 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 FAM160A1Q05DH4 1040 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 MAPKAPK5Q8IW41 473 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 DIS3L2Q8IYB7 885 aaKnown RBP16.88■□□□□ 0.29
SMG8-201ENST00000300917 TGFBRAP1Q8WUH2 860 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 TSPY2A6NKD2 308 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 BCORQ6W2J9 1755 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 DRC7Q8IY82 874 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 PROM2Q8N271 834 aa16.88■□□□□ 0.29
SMG8-201ENST00000300917 V9GY48 417 aaPredicted RBP16.88■□□□□ 0.29
SMG8-201ENST00000300917 BAZ2AQ9UIF9 1905 aaKnown RBP16.87■□□□□ 0.29
SMG8-201ENST00000300917 TXNRD1Q16881 649 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 BRAPQ7Z569 592 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 IQCA1Q86XH1 822 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 FAM205CA6NFA0 338 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
SMG8-201ENST00000300917 UVSSAQ2YD98 709 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 FMNL1O95466 1100 aaPredicted RBP16.87■□□□□ 0.29
SMG8-201ENST00000300917 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMG8-201ENST00000300917 TRIM5Q9C035 493 aa16.87■□□□□ 0.29
SMG8-201ENST00000300917 XDHP47989 1333 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 IFNAR1P17181 557 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 ADALQ6DHV7 355 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 CRACR2BQ8N4Y2 399 aaPredicted RBP16.86■□□□□ 0.29
SMG8-201ENST00000300917 ENGASEQ8NFI3 743 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 NOL7Q9UMY1 257 aaKnown RBP16.86■□□□□ 0.29
SMG8-201ENST00000300917 ZKSCAN5Q9Y2L8 839 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 MROH7-TTC4A0A0A0MT08 1334 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 SEC23AQ15436 765 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 KCNG4Q8TDN1 519 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
SMG8-201ENST00000300917 ARAP2Q8WZ64 1704 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 A0A0U1RQG5 324 aaPredicted RBP16.85■□□□□ 0.29
SMG8-201ENST00000300917 CATIPQ7Z7H3 387 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 POLR3EQ9NVU0 708 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 ONECUT3O60422 494 aaPredicted RBP16.85■□□□□ 0.29
SMG8-201ENST00000300917 PFKFB1P16118 471 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 SAFBQ15424 915 aaKnown RBP eCLIP16.85■□□□□ 0.29
SMG8-201ENST00000300917 ZNF804AQ7Z570 1209 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 SEMA3EO15041 775 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 GRIN1Q05586 938 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 FMR1NBQ8N0W7 255 aaPredicted RBP16.85■□□□□ 0.29
SMG8-201ENST00000300917 CABP5Q9NP86 173 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 POLLQ9UGP5 575 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
SMG8-201ENST00000300917 VEGFAP15692 232 aaPredicted RBP16.84■□□□□ 0.29
SMG8-201ENST00000300917 NOM1Q5C9Z4 860 aaKnown RBP16.84■□□□□ 0.29
SMG8-201ENST00000300917 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
SMG8-201ENST00000300917 TNRC6CQ9HCJ0 1690 aaKnown RBP16.84■□□□□ 0.29
SMG8-201ENST00000300917 ZNF202O95125 648 aa16.84■□□□□ 0.29
SMG8-201ENST00000300917 APBA3O96018 575 aa16.84■□□□□ 0.29
SMG8-201ENST00000300917 ZRSR1Q15695 479 aaKnown RBP16.84■□□□□ 0.29
SMG8-201ENST00000300917 ZNF827Q17R98 1081 aa16.84■□□□□ 0.29
SMG8-201ENST00000300917 CD209Q9NNX6 404 aa16.84■□□□□ 0.29
SMG8-201ENST00000300917 USP17L3A6NCW0 530 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 USP17L4A6NCW7 530 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 BECN2A8MW95 431 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 YEATS4O95619 227 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 TFAP4Q01664 338 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 RASGRP2Q7LDG7 609 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 USP17L1Q7RTZ2 530 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 NBPF11Q86T75 865 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 PDILTQ8N807 584 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 MKNK2Q9HBH9 465 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 C4BP0C0L5 1744 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 SCN7AQ01118 1682 aa16.83■□□□□ 0.29
SMG8-201ENST00000300917 AXDND1Q5T1B0 1012 aaPredicted RBP16.83■□□□□ 0.28
SMG8-201ENST00000300917 NOSTRINQ8IVI9 506 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 SHISA4Q96DD7 197 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 NRBP1Q9UHY1 535 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 LEMD3Q9Y2U8 911 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 MYH13Q9UKX3 1938 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 THSD7AQ9UPZ6 1657 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 GOLGA6L19H0YKK7 550 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 MMP1P03956 469 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 SLC39A14Q15043 492 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 MFSD14BQ5SR56 506 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 ATL3Q6DD88 541 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
SMG8-201ENST00000300917 RBM17Q96I25 401 aaKnown RBP16.83■□□□□ 0.28
SMG8-201ENST00000300917 ANAPC4Q9UJX5 808 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 PCDHB6Q9Y5E3 794 aa16.83■□□□□ 0.28
SMG8-201ENST00000300917 MYH2Q9UKX2 1941 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 DOCK2Q92608 1830 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 CCDC196A0A1B0GTZ2 297 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms