RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 RHBDL3P58872 404 aa18.4■□□□□ 0.54
HERPUD1-201ENST00000300302 CPLX2Q6PUV4 134 aaKnown RBP18.4■□□□□ 0.54
HERPUD1-201ENST00000300302 MAPKAPK5Q8IW41 473 aa18.4■□□□□ 0.54
HERPUD1-201ENST00000300302 SPON1Q9HCB6 807 aa18.4■□□□□ 0.54
HERPUD1-201ENST00000300302 TRAK2O60296 914 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 CDKL5O76039 1030 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 POLR3DP05423 398 aaPredicted RBP18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 CYP2D6P10635 497 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 DACT2Q5SW24 774 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 ZKSCAN3Q9BRR0 538 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 MXD3Q9BW11 206 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 VPS33BQ9H267 617 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 ZNF287Q9HBT7 754 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 CD2APQ9Y5K6 639 aa18.39■□□□□ 0.54
HERPUD1-201ENST00000300302 ROBO3Q96MS0 1386 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 SMIM22K7EJ46 135 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 PRDM1O75626 825 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 ZSCAN10Q96SZ4 725 aaPredicted RBP18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 MRIQ9BWK5 157 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 TNKSO95271 1327 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 CDK5RAP2Q96SN8 1893 aa18.39■□□□□ 0.53
HERPUD1-201ENST00000300302 H3BQV1 296 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 FLT1P17948 1338 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 RCAN1P53805 252 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 IFFO2Q5TF58 517 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 MICU3Q86XE3 530 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 SENP2Q9HC62 589 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 KCNQ5Q9NR82 932 aa18.38■□□□□ 0.53
HERPUD1-201ENST00000300302 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 SCNN1DP51172 638 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 HDLBPQ00341 1268 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 SEC23AQ15436 765 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 DALRD3Q5D0E6 543 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 CDC37L1Q7L3B6 337 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 RAB11FIP4Q86YS3 637 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 NLGN2Q8NFZ4 835 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 MKNK2Q9HBH9 465 aa18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 SAP30BPQ9UHR5 308 aaKnown RBP18.37■□□□□ 0.53
HERPUD1-201ENST00000300302 NID2Q14112 1375 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 FOCADQ5VW36 1801 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 TSPY2A6NKD2 308 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 CRKP46108 304 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 USP40Q9NVE5 1235 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 SCN9AQ15858 1988 aa18.36■□□□□ 0.53
HERPUD1-201ENST00000300302 CCDC196A0A1B0GTZ2 297 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 EVX2Q03828 476 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 SLC4A8Q2Y0W8 1093 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 IFIT1BQ5T764 474 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 KIAA0825Q8IV33 1275 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 LARGE2Q8N3Y3 721 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 ENAHQ8N8S7 591 aaPredicted RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 ZDHHC15Q96MV8 337 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 DDX60LQ5H9U9 1706 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 PRPF40AO75400 957 aaKnown RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 PPP2R5BQ15173 497 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 ZNF654Q8IZM8 581 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 LMBRD1Q9NUN5 540 aa18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 ORC3Q9UBD5 711 aaPredicted RBP18.35■□□□□ 0.53
HERPUD1-201ENST00000300302 GOLGB1Q14789 3259 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 ZNF646O15015 1829 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 MYO3BQ8WXR4 1341 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 RXRAP19793 462 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 ADD1P35611 737 aaKnown RBP18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 PLCD1P51178 756 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 CCDC178Q5BJE1 867 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 CATIPQ7Z7H3 387 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 ZNF444Q8N0Y2 327 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 DYNLL2Q96FJ2 89 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 MYL10Q9BUA6 226 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 SERPINA10Q9UK55 444 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 MYH1P12882 1939 aa18.34■□□□□ 0.53
HERPUD1-201ENST00000300302 YDJCA8MPS7 323 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CALM1P0DP23 149 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CALM2P0DP24 149 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CALM3P0DP25 149 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 FDPSP14324 419 aaKnown RBP18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 RTN1Q16799 776 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 FAM47AQ5JRC9 791 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 TTC6Q86TZ1 520 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CCDC144CPQ8IYA2 1237 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 BCS1LQ9Y276 419 aa18.33■□□□□ 0.53
HERPUD1-201ENST00000300302 CDC27P30260 824 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 RBM5P52756 815 aaKnown RBP eCLIP18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 TFAP4Q01664 338 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 PICALMQ13492 652 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 CDC42EP5Q6NZY7 148 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 C16orf86Q6ZW13 317 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 RGS22Q8NE09 1264 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 DDX49Q9Y6V7 483 aaKnown RBP18.33■□□□□ 0.52
HERPUD1-201ENST00000300302 WDHD1O75717 1129 aaPredicted RBP18.32■□□□□ 0.52
HERPUD1-201ENST00000300302 FERMT3Q86UX7 667 aa18.32■□□□□ 0.52
HERPUD1-201ENST00000300302 FANCBQ8NB91 859 aa18.32■□□□□ 0.52
HERPUD1-201ENST00000300302 NUP133Q8WUM0 1156 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms