RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 GNA11P29992 359 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 PDIA3P30101 505 aaKnown RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 SCRN1Q12765 414 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 AOC3Q16853 763 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 NOM1Q5C9Z4 860 aaKnown RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 FAM84BQ96KN1 310 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 SEPT11Q9NVA2 429 aaKnown RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 RABL6Q3YEC7 729 aaPredicted RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 TCERG1LQ5VWI1 586 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 KIFC2Q96AC6 838 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 DEF6Q9H4E7 631 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 SCAF8Q9UPN6 1271 aaKnown RBP11.63□□□□□ -0.55
GABRB3-201ENST00000299267 UBN2Q6ZU65 1347 aa11.63□□□□□ -0.55
GABRB3-201ENST00000299267 KDM6AO15550 1401 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 WDHD1O75717 1129 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CFBP00751 764 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 GPSM2P81274 684 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CERKLQ49MI3 558 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 NSMFQ6X4W1 530 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 SLC44A5Q8NCS7 719 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CSRNP1Q96S65 589 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 STRBPQ96SI9 672 aaKnown RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 GJB4Q9NTQ9 266 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 C3P01024 1663 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CARMIL3Q8ND23 1372 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 ADRA2BP18089 450 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 RBM28Q9NW13 759 aaKnown RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 DCCP43146 1447 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CDHR2Q9BYE9 1310 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 USP17L3A6NCW0 530 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 USP17L4A6NCW7 530 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 BTBD18B2RXH4 712 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 CHMP2AO43633 222 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 ARID4AP29374 1257 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 NECTIN1Q15223 517 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 USP17L1Q7RTZ2 530 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 ZNF830Q96NB3 372 aaPredicted RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 AIFM3Q96NN9 605 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 ARHGEF10LQ9HCE6 1279 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 ZNHIT6Q9NWK9 470 aaKnown RBP11.62□□□□□ -0.55
GABRB3-201ENST00000299267 MAPK8IP1Q9UQF2 711 aa11.62□□□□□ -0.55
GABRB3-201ENST00000299267 KLRF2D3W0D1 207 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 CTAGE5O15320 804 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 PRKCSHP14314 528 aaPredicted RBP11.61□□□□□ -0.55
GABRB3-201ENST00000299267 TXKP42681 527 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 DALRD3Q5D0E6 543 aaKnown RBP11.61□□□□□ -0.55
GABRB3-201ENST00000299267 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 MMRN2Q9H8L6 949 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 ITSN1Q15811 1721 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 ADCY5O95622 1261 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 ASIC1P78348 528 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 CCDC93Q567U6 631 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 ANO1Q5XXA6 986 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 DTHD1Q6ZMT9 781 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 SH3RF3Q8TEJ3 882 aaPredicted RBP11.61□□□□□ -0.55
GABRB3-201ENST00000299267 MXD3Q9BW11 206 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
GABRB3-201ENST00000299267 ATP8A2Q9NTI2 1148 aa11.61□□□□□ -0.55
GABRB3-201ENST00000299267 NTSR2O95665 410 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 APOA5Q6Q788 366 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 BRAPQ7Z569 592 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 CPVLQ9H3G5 476 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 BIN2Q9UBW5 565 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 CCNT1O60563 726 aaKnown RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 SLC16A2P36021 539 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 MRPL12P52815 198 aaKnown RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 EHMT1Q9H9B1 1298 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 COL3A1P02461 1466 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 STX1AQ16623 288 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 IL25Q9H293 177 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 TRMT1Q9NXH9 659 aaKnown RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 NCOA3Q9Y6Q9 1424 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 ERCC3P19447 782 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 MTIF2P46199 727 aaKnown RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 RAD51AP2Q09MP3 1159 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 AOPEPQ8N6M6 819 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 LEO1Q8WVC0 666 aaPredicted RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 LLPHQ9BRT6 129 aaKnown RBP11.6□□□□□ -0.55
GABRB3-201ENST00000299267 PIM2Q9P1W9 311 aa11.6□□□□□ -0.55
GABRB3-201ENST00000299267 GLIPR1L2Q4G1C9 344 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 LRSAM1Q6UWE0 723 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 KRI1Q8N9T8 703 aaKnown RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 CNKSR2Q8WXI2 1034 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 COL5A2P05997 1499 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 REREQ9P2R6 1566 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 UBR1Q8IWV7 1749 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 A0A0U1RQG5 324 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 DDX39AO00148 427 aaKnown RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 MYCLP12524 364 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 KLRK1P26718 216 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 ICA1Q05084 483 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 PPP4R3BQ5MIZ7 849 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 MNS1Q8NEH6 495 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 RASGRP4Q8TDF6 673 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 ZNF274Q96GC6 653 aaPredicted RBP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 USP28Q96RU2 1077 aa11.59□□□□□ -0.55
GABRB3-201ENST00000299267 FTOQ9C0B1 505 aaKnown RBP eCLIP11.59□□□□□ -0.55
GABRB3-201ENST00000299267 TMX1Q9H3N1 280 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms