RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ME3Q16798 604 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 SLC4A8Q2Y0W8 1093 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 ZFPM1Q8IX07 1006 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 IGDCC4Q8TDY8 1250 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 ESR2Q92731 530 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 BRF1Q92994 677 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 DYNLL2Q96FJ2 89 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 MYOZ2Q9NPC6 264 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 LARGE1O95461 756 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 NT5C2P49902 561 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 RRP12Q5JTH9 1297 aaKnown RBP29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 TTC6Q86TZ1 520 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 GPC2Q8N158 579 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 TMEM87BQ96K49 555 aa29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 SH2B1Q9NRF2 756 aaPredicted RBP29.05■■■□□ 2.24
GTF2A1-201ENST00000298173 SPDYE2Q495Y8 402 aa29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 GPHNQ9NQX3 736 aaPredicted RBP29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 TOMM22Q9NS69 142 aa29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 RNF181Q9P0P0 153 aa29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 ZNF70Q9UC06 446 aaPredicted RBP29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 CNOT7Q9UIV1 285 aaKnown RBP29.04■■■□□ 2.24
GTF2A1-201ENST00000298173 WNT10BO00744 389 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 ENTPD3O75355 529 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 PRDM1O75626 825 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 GABPAQ06546 454 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 GPR162Q16538 588 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 C16orf86Q6ZW13 317 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 SPRYD3Q8NCJ5 442 aa29.03■■■□□ 2.24
GTF2A1-201ENST00000298173 FGD1P98174 961 aa29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 MICALL2Q8IY33 904 aa29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 FKBP1CQ5VVH2 108 aa29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 C9orf131Q5VYM1 1079 aa29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 INTS4Q96HW7 963 aaKnown RBP29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 DHX36Q9H2U1 1008 aaKnown RBP29.02■■■□□ 2.24
GTF2A1-201ENST00000298173 SH2B2O14492 632 aaPredicted RBP29.01■■■□□ 2.23
GTF2A1-201ENST00000298173 SH3BP5LQ7L8J4 393 aa29.01■■■□□ 2.23
GTF2A1-201ENST00000298173 ANGEL1Q9UNK9 670 aaKnown RBP29.01■■■□□ 2.23
GTF2A1-201ENST00000298173 GRIN3BO60391 1043 aa29■■■□□ 2.23
GTF2A1-201ENST00000298173 CDK8P49336 464 aa29■■■□□ 2.23
GTF2A1-201ENST00000298173 APOBRQ0VD83 1088 aa29■■■□□ 2.23
GTF2A1-201ENST00000298173 TCP10Q12799 353 aa29■■■□□ 2.23
GTF2A1-201ENST00000298173 NBPF9Q3BBW0 867 aa29■■■□□ 2.23
GTF2A1-201ENST00000298173 COL2A1P02458 1487 aaPredicted RBP29■■■□□ 2.23
GTF2A1-201ENST00000298173 RANBP6O60518 1105 aaKnown RBP28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 EGFRP00533 1210 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 DDIT3P35638 169 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 LIFRP42702 1097 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 ST3GAL1Q11201 340 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 SLC44A5Q8NCS7 719 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 ZNF274Q96GC6 653 aaPredicted RBP28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 ATRNL1Q5VV63 1379 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 SIPA1L1O43166 1804 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 DDTLA6NHG4 134 aaPredicted RBP28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 EHD4Q9H223 541 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 LY9Q9HBG7 655 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 ZNF287Q9HBT7 754 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 TMOD2Q9NZR1 351 aa28.99■■■□□ 2.23
GTF2A1-201ENST00000298173 CLRN2A0PK11 232 aa28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 HSP90AA1P07900 732 aaKnown RBP28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 SGMS1Q86VZ5 419 aa28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 MKNK2Q9HBH9 465 aa28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 GPRC5DQ9NZD1 345 aa28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 BRPF3Q9ULD4 1205 aa28.98■■■□□ 2.23
GTF2A1-201ENST00000298173 IFIT3O14879 490 aaKnown RBP28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 MYO1BO43795 1136 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 RASA1P20936 1047 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 SEC23AQ15436 765 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 SAMD7Q7Z3H4 446 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 FOXD4L1Q9NU39 408 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 SERPINB13Q9UIV8 391 aa28.97■■■□□ 2.23
GTF2A1-201ENST00000298173 HLA-DOAP06340 250 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 PDIA3P30101 505 aaKnown RBP28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 TMEM67Q5HYA8 995 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 METTL16Q86W50 562 aaKnown RBP28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 FAM151AQ8WW52 585 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 ZKSCAN3Q9BRR0 538 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 SENP2Q9HC62 589 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 PI4KBQ9UBF8 816 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 TAOK2Q9UL54 1235 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 CNTNAP1P78357 1384 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 H7C1D1 291 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 PFKFB2O60825 505 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 FAM47AQ5JRC9 791 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 NECAB1Q8N987 351 aa28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 ZSCAN10Q96SZ4 725 aaPredicted RBP28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 SLKQ9H2G2 1235 aaPredicted RBP28.96■■■□□ 2.23
GTF2A1-201ENST00000298173 TCP10L2B9ZVM9 353 aa28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 DDNO94850 711 aaPredicted RBP28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 SART3Q15020 963 aaKnown RBP28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 RBM26Q5T8P6 1007 aaKnown RBP28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 FAM83AQ86UY5 434 aa28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 IQCA1Q86XH1 822 aa28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 ZNF444Q8N0Y2 327 aaPredicted RBP28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 SWAP70Q9UH65 585 aa28.95■■■□□ 2.22
GTF2A1-201ENST00000298173 TFAP4Q01664 338 aa28.94■■■□□ 2.22
GTF2A1-201ENST00000298173 FOXP4Q8IVH2 680 aaPredicted RBP28.94■■■□□ 2.22
GTF2A1-201ENST00000298173 CCDC83Q8IWF9 413 aa28.94■■■□□ 2.22
GTF2A1-201ENST00000298173 TMTC2Q8N394 836 aa28.94■■■□□ 2.22
GTF2A1-201ENST00000298173 UBAC1Q9BSL1 405 aa28.94■■■□□ 2.22
GTF2A1-201ENST00000298173 TCP11L1Q9NUJ3 509 aa28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms