RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 SRGAP1Q7Z6B7 1085 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 ACRBPQ8NEB7 543 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 ANKRD20A12PQ8NF67 263 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 CWC25Q9NXE8 425 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-201ENST00000297423 KDM3BQ7LBC6 1761 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
SPIDR-201ENST00000297423 BRD3Q15059 726 aa16.89■□□□□ 0.29
SPIDR-201ENST00000297423 AKR1B15C9JRZ8 316 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 E7EWF7 191 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 PRC1O43663 620 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 RNF40O75150 1001 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 VSNL1P62760 191 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 CT47A1Q5JQC4 288 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 SPECC1LQ69YQ0 1117 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 GIMAP7Q8NHV1 300 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 MRPL44Q9H9J2 332 aaKnown RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 MRFAP1Q9Y605 127 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 IGKV5-2P06315 115 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 NAP1L1P55209 391 aaKnown RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 FAM98CQ17RN3 349 aaKnown RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 VSTM4Q8IW00 320 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 PNKPQ96T60 521 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 SHTN1A0MZ66 631 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 IFIT1P09914 478 aaKnown RBP16.88■□□□□ 0.29
SPIDR-201ENST00000297423 BANK1Q8NDB2 785 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 PSMB7Q99436 277 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 MAPK8IP1Q9UQF2 711 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 SPATA31A1Q5TZJ5 1347 aa16.88■□□□□ 0.29
SPIDR-201ENST00000297423 POLR2DO15514 142 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 ADD1P35611 737 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 SAFBQ15424 915 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 ATG3Q9NT62 314 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 DBNLQ9UJU6 430 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 CTDNEP1O95476 244 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NBPF26B4DH59 902 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 IPO7O95373 1038 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 MAP2K2P36507 400 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 FBXW10Q5XX13 1052 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NBPF10Q6P3W6 841 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NBPF15Q8N660 670 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NUP133Q8WUM0 1156 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 VPS16Q9H269 839 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 KCNH3Q9ULD8 1083 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 PARP4Q9UKK3 1724 aaKnown RBP16.87■□□□□ 0.29
SPIDR-201ENST00000297423 N4BP3O15049 544 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 ATP8B1O43520 1251 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 MAP3K9P80192 1104 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 JADE2Q9NQC1 790 aa16.87■□□□□ 0.29
SPIDR-201ENST00000297423 NOP2P46087 812 aaKnown RBP16.86■□□□□ 0.29
SPIDR-201ENST00000297423 IMMTQ16891 758 aaKnown RBP16.86■□□□□ 0.29
SPIDR-201ENST00000297423 CCDC91Q7Z6B0 441 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 KIAA1328Q86T90 577 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 EEF2KMTQ96G04 330 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 LTBP4Q8N2S1 1624 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 ECM2O94769 699 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-201ENST00000297423 ATP2B2Q01814 1243 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 CEP57Q86XR8 500 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 SMYD4Q8IYR2 804 aaPredicted RBP16.86■□□□□ 0.29
SPIDR-201ENST00000297423 SLC26A6Q9BXS9 759 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 RTEL1Q9NZ71 1219 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 CARMIL3Q8ND23 1372 aa16.86■□□□□ 0.29
SPIDR-201ENST00000297423 AHDC1Q5TGY3 1603 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-201ENST00000297423 CASP1P29466 404 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 CCDC70Q6NSX1 233 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 LLPHQ9BRT6 129 aaKnown RBP16.85■□□□□ 0.29
SPIDR-201ENST00000297423 CDC23Q9UJX2 597 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 BCAS4Q8TDM0 211 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 AKAP2Q9Y2D5 859 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 SCN11AQ9UI33 1791 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 CRYBG1Q9Y4K1 1723 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 POTEB2H3BUK9 544 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 CUTAO60888 179 aa16.85■□□□□ 0.29
SPIDR-201ENST00000297423 MYCNP04198 464 aaPredicted RBP16.85■□□□□ 0.29
SPIDR-201ENST00000297423 JCADQ9P266 1359 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 FANCGO15287 622 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 FAM53CQ9NYF3 392 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 CAPN7Q9Y6W3 813 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 TEX33O43247 280 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 ATP6V1AP38606 617 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 TNNI3KQ59H18 835 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 FPGT-TNNI3KV9GXZ4 949 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 FRMD3A2A2Y4 597 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 SRGAP2O75044 1071 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 ATP1A2P50993 1020 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 NCAPHQ15003 741 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 VPS37DQ86XT2 251 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 NAPGQ99747 312 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-201ENST00000297423 JPH2Q9BR39 696 aaPredicted RBP16.84■□□□□ 0.29
SPIDR-201ENST00000297423 USP21Q9UK80 565 aa16.84■□□□□ 0.29
SPIDR-201ENST00000297423 KIF28PB7ZC32 967 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 PDE4BQ07343 736 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 RBL2Q08999 1139 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 FAM76AQ8TAV0 307 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 PAG1Q9NWQ8 432 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 SERTAD1Q9UHV2 236 aa16.83■□□□□ 0.29
SPIDR-201ENST00000297423 COL14A1Q05707 1796 aaKnown RBP16.83■□□□□ 0.29
SPIDR-201ENST00000297423 PHLPP1O60346 1717 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms