RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 LIG1P18858 919 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 SART3Q15020 963 aaKnown RBP15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 C12orf60Q5U649 245 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 ZSCAN10Q96SZ4 725 aaPredicted RBP15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 ARPP21Q9UBL0 812 aaPredicted RBP15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 RCAN1P53805 252 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 GSTO1P78417 241 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 MFSD14BQ5SR56 506 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 CCDC183Q5T5S1 534 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 SYAP1Q96A49 352 aaPredicted RBP15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 MCM9Q9NXL9 1143 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 CFAP45Q9UL16 551 aa15.85■□□□□ 0.13
CHMP4C-201ENST00000297265 RIMBP2O15034 1052 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 CDKL5O76039 1030 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 GUCY1A2P33402 732 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 MPNDQ8N594 471 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 FANCBQ8NB91 859 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 UBAC1Q9BSL1 405 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 ALG1Q9BT22 464 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 COA1Q9GZY4 146 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 ERICH2A1L162 156 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 NMT2O60551 498 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 FMNL1O95466 1100 aaPredicted RBP15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 LDHCP07864 332 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 IARSP41252 1262 aaKnown RBP15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 RHBDL3P58872 404 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 KIF23Q02241 960 aaPredicted RBP15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 ATL3Q6DD88 541 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 CERS5Q8N5B7 392 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 GAKO14976 1311 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 STK36Q9NRP7 1315 aa15.84■□□□□ 0.13
CHMP4C-201ENST00000297265 BAG3O95817 575 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 GTF2IP78347 998 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 CEBPZQ03701 1054 aaKnown RBP15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 TROAPQ12815 778 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 KRT40Q6A162 431 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 CMTR1Q8N1G2 835 aaKnown RBP15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 CRACR2BQ8N4Y2 399 aaPredicted RBP15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 TBC1D22AQ8WUA7 517 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 TGFBRAP1Q8WUH2 860 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 FUCA2Q9BTY2 467 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 PDGFDQ9GZP0 370 aaPredicted RBP15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 SLX4Q8IY92 1834 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 QSER1Q2KHR3 1735 aa15.83■□□□□ 0.12
CHMP4C-201ENST00000297265 POLR3DP05423 398 aaPredicted RBP15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 BTDP43251 543 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 PLCD1P51178 756 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 FUT2Q10981 343 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 RTN1Q16799 776 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 SLC4A8Q2Y0W8 1093 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 FAM47AQ5JRC9 791 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 RCSD1Q6JBY9 416 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 SYNE3Q6ZMZ3 975 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 DYNLL2Q96FJ2 89 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 DDX60LQ5H9U9 1706 aaKnown RBP15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 ROBO3Q96MS0 1386 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 USP5P45974 858 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 CPLX2Q6PUV4 134 aaKnown RBP15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 DPP8Q6V1X1 898 aaPredicted RBP15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 SLC26A6Q9BXS9 759 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 RTEL1Q9NZ71 1219 aa15.82■□□□□ 0.12
CHMP4C-201ENST00000297265 NASPP49321 788 aaPredicted RBP15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 SSRP1Q08945 709 aaKnown RBP15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 MYSM1Q5VVJ2 828 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 IQCA1Q86XH1 822 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 C2CD5Q86YS7 1000 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 ZNF622Q969S3 477 aaKnown RBP eCLIP15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 SHISA4Q96DD7 197 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 IL17RBQ9NRM6 502 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 NAV1Q8NEY1 1877 aa15.81■□□□□ 0.12
CHMP4C-201ENST00000297265 NR1I2O75469 434 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 U2AF2P26368 475 aaKnown RBP eCLIP15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 PDE4BQ07343 736 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 DOK7Q18PE1 504 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 IFIT1BQ5T764 474 aaKnown RBP15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 STYK1Q6J9G0 422 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 BRAPQ7Z569 592 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 CCDC82Q8N4S0 544 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 LINC00301Q8NCQ3 95 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 ZNF396Q96N95 335 aaPredicted RBP15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 MXD3Q9BW11 206 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 CLIC4Q9Y696 253 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 LETM1O95202 739 aaPredicted RBP15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 CHRNA5P30532 468 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 PPP2R5BQ15173 497 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 MAPKAPK5Q8IW41 473 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 KCNQ5Q9NR82 932 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 DACT1Q9NYF0 836 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 DAGLAQ9Y4D2 1042 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 FOCADQ5VW36 1801 aa15.8■□□□□ 0.12
CHMP4C-201ENST00000297265 CCDC196A0A1B0GTZ2 297 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 H0YIN7 160 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 SLC3A2P08195 630 aaKnown RBP15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 PKN1Q16512 942 aa15.79■□□□□ 0.12
CHMP4C-201ENST00000297265 CERS3Q8IU89 383 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms