RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 PTPN21Q16825 1174 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 KRT27Q7Z3Y8 459 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 RGS22Q8NE09 1264 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 CARD6Q9BX69 1037 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 INCENPQ9NQS7 918 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 BSDC1Q9NW68 430 aaPredicted RBP17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 SBF2Q86WG5 1849 aa17.59■□□□□ 0.41
LRRTM1-201ENST00000295057 URI1O94763 535 aaPredicted RBP17.58■□□□□ 0.41
LRRTM1-201ENST00000295057 GOLGA8FQ08AF8 430 aa17.58■□□□□ 0.41
LRRTM1-201ENST00000295057 GOLGA8DPQ0D2H9 430 aa17.58■□□□□ 0.41
LRRTM1-201ENST00000295057 TRIM65Q6PJ69 517 aa17.58■□□□□ 0.41
LRRTM1-201ENST00000295057 EFCC1Q9HA90 598 aa17.58■□□□□ 0.41
LRRTM1-201ENST00000295057 SCN7AQ01118 1682 aa17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 TADA3O75528 432 aa17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 RPS8P62241 208 aaKnown RBP17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 EXOSC10Q01780 885 aaKnown RBP17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 NAA16Q6N069 864 aaPredicted RBP17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 NYXQ9GZU5 481 aa17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 ARGLU1Q9NWB6 273 aaPredicted RBP17.58■□□□□ 0.4
LRRTM1-201ENST00000295057 ISM2Q6H9L7 571 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 KRBA2Q6ZNG9 492 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 MIGA1Q8NAN2 632 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 MNS1Q8NEH6 495 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 CCDC34Q96HJ3 373 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 NBPF3Q9H094 633 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 ARMT1Q9H993 441 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 TFCP2L1Q9NZI6 479 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 ABCF2Q9UG63 623 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 PRKAB2O43741 272 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 LMOD1P29536 600 aaPredicted RBP17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 TM4SF1P30408 202 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 UBE3CQ15386 1083 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 TEX35Q5T0J7 233 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 RAB11FIP4Q86YS3 637 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 MRPS27Q92552 414 aaKnown RBP17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 KIAA1468Q9P260 1216 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 JAG2Q9Y219 1238 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 NEDD4P46934 1319 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 C4BP0C0L5 1744 aa17.57■□□□□ 0.4
LRRTM1-201ENST00000295057 PFKFB2O60825 505 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 MBD4O95243 580 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 TBC1D8O95759 1140 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 OAS2P29728 719 aaKnown RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 GYS2P54840 703 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 NCAPHQ15003 741 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 TICAM2Q86XR7 235 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 FAM177A1Q8N128 213 aaPredicted RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 PROM2Q8N271 834 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 ZFP91Q96JP5 570 aaPredicted RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 TPM4P67936 248 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 AIDAQ96BJ3 306 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 ZNF396Q96N95 335 aaPredicted RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 STRBPQ96SI9 672 aaKnown RBP17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 PHLPP2Q6ZVD8 1323 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 LY75O60449 1722 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 LAMB2P55268 1798 aa17.56■□□□□ 0.4
LRRTM1-201ENST00000295057 STK11IPQ8N1F8 1099 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 FAM84BQ96KN1 310 aaPredicted RBP17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 UBXN6Q9BZV1 441 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 TMX1Q9H3N1 280 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 LRP2BPQ9P2M1 347 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 PARP3Q9Y6F1 533 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 TAF1LQ8IZX4 1826 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 ZNF213O14771 459 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 EVCP57679 992 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 MAP3K12Q12852 859 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 TBC1D10CQ8IV04 446 aa17.55■□□□□ 0.4
LRRTM1-201ENST00000295057 COL1A1P02452 1464 aaPredicted RBP17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 KCNJ6P48051 423 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 ZRSR1Q15695 479 aaKnown RBP17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 OTUD7BQ6GQQ9 843 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 TXNRD3Q86VQ6 643 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 DPF2Q92785 391 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 LCMT1Q9UIC8 334 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 TXLNBQ8N3L3 684 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 LCORLQ8N3X6 602 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 EPB41L4AQ9HCS5 686 aaPredicted RBP17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 RSPH14Q9UHP6 348 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 CLIC4Q9Y696 253 aa17.54■□□□□ 0.4
LRRTM1-201ENST00000295057 ANTXR2P58335 489 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 FANCCQ00597 558 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 SMC1AQ14683 1233 aaKnown RBP17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 REXO1L1PQ8IX06 675 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 ZBTB9Q96C00 473 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 HSD3B7Q9H2F3 369 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 RASSF4Q9H2L5 321 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 LAMA4Q16363 1823 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 EFCAB8A8MWE9 144 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 HMGB1P09429 215 aaKnown RBP17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 GYS1P13807 737 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 MUM1L1Q5H9M0 696 aa17.53■□□□□ 0.4
LRRTM1-201ENST00000295057 ADALQ6DHV7 355 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms