RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 NOSTRINQ8IVI9 506 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 OXER1Q8TDS5 423 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 MAP3K14Q99558 947 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 RNF41Q9H4P4 317 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 IFNKQ9P0W0 207 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 COL1A1P02452 1464 aaPredicted RBP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 GNPATO15228 680 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 SARM1Q6SZW1 724 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 PDILTQ8N807 584 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 FANCBQ8NB91 859 aa18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 TRMT1Q9NXH9 659 aaKnown RBP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 AATFQ9NY61 560 aaKnown RBP eCLIP18.23■□□□□ 0.51
NCKIPSD-201ENST00000294129 MYH2Q9UKX2 1941 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 U2AF2P26368 475 aaKnown RBP eCLIP18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 ESR2Q92731 530 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 PRIMPOLQ96LW4 560 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 ARAP2Q8WZ64 1704 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 RIOK3O14730 519 aaKnown RBP18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 FOXN1O15353 648 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 LONRF3Q496Y0 759 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 MRFAP1L1Q96HT8 127 aa18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 BSDC1Q9NW68 430 aaPredicted RBP18.22■□□□□ 0.51
NCKIPSD-201ENST00000294129 MMP1P03956 469 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 AKAP17AQ02040 695 aaKnown RBP18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 CNNM3Q8NE01 707 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 SETDB2Q96T68 719 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 XPO4Q9C0E2 1151 aaKnown RBP18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 VPS54Q9P1Q0 977 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 DOCK2Q92608 1830 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 SKILP12757 684 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 NLRP12P59046 1061 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 CRACR2BQ8N4Y2 399 aaPredicted RBP18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 ZNF384Q8TF68 577 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 WASF1Q92558 559 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 PCDHB6Q9Y5E3 794 aa18.21■□□□□ 0.51
NCKIPSD-201ENST00000294129 FAM205CA6NFA0 338 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 USP27XA6NNY8 438 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 USP17L12C9JPN9 530 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 USP17L21D6R901 530 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 NMT2O60551 498 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 TOB1P50616 345 aaPredicted RBP18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 UBE4AQ14139 1066 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 CLEC4GQ6UXB4 293 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 RIOK1Q9BRS2 568 aaKnown RBP18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 CABP5Q9NP86 173 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 KCNH3Q9ULD8 1083 aa18.21■□□□□ 0.5
NCKIPSD-201ENST00000294129 ECM29Q5VYK3 1845 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 TNNT1P13805 278 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 PRDX5P30044 214 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 TMC6Q7Z403 805 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 ENAHQ8N8S7 591 aaPredicted RBP18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 BCL2L12Q9HB09 334 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 RTL9Q8NET4 1388 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 PPP6R2O75170 966 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 ZPR1O75312 459 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 CDC25BP30305 580 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 FAM47AQ5JRC9 791 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 IFIT1BQ5T764 474 aaKnown RBP18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 BARGINQ6ZT62 677 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 AMIGO3Q86WK7 504 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 NLRP3Q96P20 1036 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 ZNF804BA4D1E1 1349 aa18.2■□□□□ 0.5
NCKIPSD-201ENST00000294129 PLEKHA8P1O95397 391 aa18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 CCDC196A0A1B0GTZ2 297 aa18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 DEXIO95424 95 aa18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 NBPF11Q86T75 865 aa18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 GRAMD1CQ8IYS0 662 aa18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 KRI1Q8N9T8 703 aaKnown RBP18.19■□□□□ 0.5
NCKIPSD-201ENST00000294129 CYP2D6P10635 497 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 MECOMQ03112 1051 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 RESP18Q5W5W9 173 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 TXNRD3Q86VQ6 643 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 MTMR7Q9Y216 660 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 V9GY48 417 aaPredicted RBP18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 STK36Q9NRP7 1315 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 METTL16Q86W50 562 aaKnown RBP18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 ZSCAN10Q96SZ4 725 aaPredicted RBP18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 BCL9LQ86UU0 1499 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 NRAPQ86VF7 1730 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 POLR2DO15514 142 aaKnown RBP18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 CUTAO60888 179 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 TPM4P67936 248 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 TMTC2Q8N394 836 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 HPSEQ9Y251 543 aa18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 CICQ96RK0 1608 aaPredicted RBP18.18■□□□□ 0.5
NCKIPSD-201ENST00000294129 ZNF827Q17R98 1081 aa18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 PCDHA5Q9Y5H7 936 aa18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 HIBADHP31937 336 aaKnown RBP18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 USP49Q70CQ1 688 aa18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 CATIPQ7Z7H3 387 aa18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 IQCA1Q86XH1 822 aa18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 GPR101Q96P66 508 aaPredicted RBP18.17■□□□□ 0.5
NCKIPSD-201ENST00000294129 EP400Q96L91 3159 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms