RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MLH3Q9UHC1 1453 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 ATP6V0A2Q9Y487 856 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 EFCAB6Q5THR3 1501 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 PFKFB2O60825 505 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 ATP2A2P16615 1042 aaKnown RBP14.32□□□□□ -0.12
PTCD1-201ENST00000292478 RBM26Q5T8P6 1007 aaKnown RBP14.32□□□□□ -0.12
PTCD1-201ENST00000292478 FCHSD1Q86WN1 690 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 GPR108Q9NPR9 543 aa14.32□□□□□ -0.12
PTCD1-201ENST00000292478 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.32□□□□□ -0.12
PTCD1-201ENST00000292478 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 GRIPAP1Q4V328 841 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 PCCAP05165 728 aaPredicted RBP14.31□□□□□ -0.12
PTCD1-201ENST00000292478 HSPA2P54652 639 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 CLUL1Q15846 466 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 DCAF17Q5H9S7 520 aaPredicted RBP14.31□□□□□ -0.12
PTCD1-201ENST00000292478 WDR44Q5JSH3 913 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 AATFQ9NY61 560 aaKnown RBP eCLIP14.31□□□□□ -0.12
PTCD1-201ENST00000292478 LRWD1Q9UFC0 647 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 CALCOCO2Q13137 446 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 RGS22Q8NE09 1264 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 CSRNP2Q9H175 543 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 NUCKS1Q9H1E3 243 aaKnown RBP14.31□□□□□ -0.12
PTCD1-201ENST00000292478 OSBPL3Q9H4L5 887 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 PLS1Q14651 629 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 ME3Q16798 604 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 SAMD9LQ8IVG5 1584 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 CCDC50Q8IVM0 306 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 VPS16Q9H269 839 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 RGS12O14924 1447 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 EVCP57679 992 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 PPARAQ07869 468 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 RAPGEF1Q13905 1077 aa14.31□□□□□ -0.12
PTCD1-201ENST00000292478 ZBTB38Q8NAP3 1195 aaPredicted RBP14.31□□□□□ -0.12
PTCD1-201ENST00000292478 A6NNZ2 444 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TUBB8Q3ZCM7 444 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 CCDC51Q96ER9 411 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TMEM110-MUSTN1A8MSY1 372 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 BACH1O14867 736 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TAF5LO75529 589 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 PCP11498 1178 aaKnown RBP14.3□□□□□ -0.12
PTCD1-201ENST00000292478 CFAP58Q5T655 872 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TMEM87AQ8NBN3 555 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 ATRIPQ8WXE1 791 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 COMMD10Q9Y6G5 202 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TNFAIP3P21580 790 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 ASIC2Q16515 512 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 JAG2Q9Y219 1238 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 PABPN1LA6NDY0 278 aaKnown RBP14.3□□□□□ -0.12
PTCD1-201ENST00000292478 CAPN2P17655 700 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 TXKP42681 527 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 CCDC97Q96F63 343 aaPredicted RBP14.3□□□□□ -0.12
PTCD1-201ENST00000292478 COPRSQ9NQ92 184 aa14.3□□□□□ -0.12
PTCD1-201ENST00000292478 RHOXF2BP0C7M4 288 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 RHOXF2Q9BQY4 288 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 TSKSQ9UJT2 592 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 SHROOM2Q13796 1616 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 GADD45BO75293 160 aaPredicted RBP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 CCDC84Q86UT8 332 aaPredicted RBP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 KCNG1Q9UIX4 513 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 CIAO1O76071 339 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 ARID4AP29374 1257 aaPredicted RBP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 FNBP1Q96RU3 617 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 SLAIN2Q9P270 581 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 EBAG9O00559 213 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 ATP5DP30049 168 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 EAF2Q96CJ1 260 aaPredicted RBP14.29□□□□□ -0.12
PTCD1-201ENST00000292478 NFE2L3Q9Y4A8 694 aa14.29□□□□□ -0.12
PTCD1-201ENST00000292478 JAK2O60674 1132 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PPP1R7Q15435 360 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 GALNT17Q6IS24 598 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 FAM173BQ6P4H8 233 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 DPP8Q6V1X1 898 aaPredicted RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 FAM76AQ8TAV0 307 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 SNX29Q8TEQ0 813 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 NOX5Q96PH1 765 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 NT5C3AQ9H0P0 336 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 ZMYM6O95789 1325 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 MYCNP04198 464 aaPredicted RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PDE6BP35913 854 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 CALCRLQ16602 461 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 OTUD7BQ6GQQ9 843 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PAXIP1Q6ZW49 1069 aaPredicted RBP14.28□□□□□ -0.12
PTCD1-201ENST00000292478 CROCCP2Q86T23 111 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 KIAA1524Q8TCG1 905 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PHKBQ93100 1093 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 RSPH14Q9UHP6 348 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 DNM3Q9UQ16 869 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PRDM1O75626 825 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 GNA14O95837 355 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 CABP7Q86V35 215 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 IFT81Q8WYA0 676 aa14.28□□□□□ -0.12
PTCD1-201ENST00000292478 PPP1R9BQ96SB3 815 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms