RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 GRAPLQ8TC17 118 aaPredicted RBP22.12■■□□□ 1.13
SHF-201ENST00000290894 CERKQ8TCT0 537 aa22.12■■□□□ 1.13
SHF-201ENST00000290894 SEMA3EO15041 775 aa22.12■■□□□ 1.13
SHF-201ENST00000290894 FMNL1O95466 1100 aaPredicted RBP22.12■■□□□ 1.13
SHF-201ENST00000290894 C11orf57Q6ZUT1 292 aaPredicted RBP22.12■■□□□ 1.13
SHF-201ENST00000290894 DZIP1Q86YF9 867 aaKnown RBP22.12■■□□□ 1.13
SHF-201ENST00000290894 FANCBQ8NB91 859 aa22.12■■□□□ 1.13
SHF-201ENST00000290894 KCNG4Q8TDN1 519 aa22.12■■□□□ 1.13
SHF-201ENST00000290894 ONECUT3O60422 494 aaPredicted RBP22.11■■□□□ 1.13
SHF-201ENST00000290894 WDHD1O75717 1129 aaPredicted RBP22.11■■□□□ 1.13
SHF-201ENST00000290894 GYS1P13807 737 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 IFNAR1P17181 557 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 FAM47AQ5JRC9 791 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 FMR1NBQ8N0W7 255 aaPredicted RBP22.11■■□□□ 1.13
SHF-201ENST00000290894 SDF4Q9BRK5 362 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 BRIP1Q9BX63 1249 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 DCP1AQ9NPI6 582 aaPredicted RBP22.11■■□□□ 1.13
SHF-201ENST00000290894 BTBD18B2RXH4 712 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 SEC23AQ15436 765 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 DIXDC1Q155Q3 683 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 ANAPC4Q9UJX5 808 aa22.11■■□□□ 1.13
SHF-201ENST00000290894 YEATS4O95619 227 aa22.1■■□□□ 1.13
SHF-201ENST00000290894 RPGRQ92834 1020 aaKnown RBP22.1■■□□□ 1.13
SHF-201ENST00000290894 ZSCAN10Q96SZ4 725 aaPredicted RBP22.1■■□□□ 1.13
SHF-201ENST00000290894 MROH7-TTC4A0A0A0MT08 1334 aa22.1■■□□□ 1.13
SHF-201ENST00000290894 TRIM22Q8IYM9 498 aa22.1■■□□□ 1.13
SHF-201ENST00000290894 IRS2Q9Y4H2 1338 aa22.09■■□□□ 1.13
SHF-201ENST00000290894 NBPF11Q86T75 865 aa22.09■■□□□ 1.13
SHF-201ENST00000290894 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.09■■□□□ 1.13
SHF-201ENST00000290894 CRNKL1Q9BZJ0 848 aaKnown RBP22.09■■□□□ 1.13
SHF-201ENST00000290894 IFIT1BQ5T764 474 aaKnown RBP22.09■■□□□ 1.13
SHF-201ENST00000290894 CRACR2BQ8N4Y2 399 aaPredicted RBP22.09■■□□□ 1.13
SHF-201ENST00000290894 CLIC6Q96NY7 704 aa22.09■■□□□ 1.13
SHF-201ENST00000290894 SERPINB2P05120 415 aa22.08■■□□□ 1.13
SHF-201ENST00000290894 AXDND1Q5T1B0 1012 aaPredicted RBP22.08■■□□□ 1.13
SHF-201ENST00000290894 USP17L8P0C7I0 530 aa22.08■■□□□ 1.12
SHF-201ENST00000290894 ATP2B1P20020 1258 aa22.08■■□□□ 1.12
SHF-201ENST00000290894 GPSM2P81274 684 aa22.08■■□□□ 1.12
SHF-201ENST00000290894 NR5A1Q13285 461 aa22.08■■□□□ 1.12
SHF-201ENST00000290894 DIS3L2Q8IYB7 885 aaKnown RBP22.08■■□□□ 1.12
SHF-201ENST00000290894 TMTC2Q8N394 836 aa22.08■■□□□ 1.12
SHF-201ENST00000290894 C17orf53Q8N3J3 647 aaPredicted RBP22.08■■□□□ 1.12
SHF-201ENST00000290894 SLC39A14Q15043 492 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 MCM9Q9NXL9 1143 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 DUOX1Q9NRD9 1551 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 A0A1W2PQ27 194 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 A0A1W2PQ64 194 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 A0A1W2PQD8 194 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 PLEKHA8P1O95397 391 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 PFKFB1P16118 471 aa22.07■■□□□ 1.12
SHF-201ENST00000290894 U2AF2P26368 475 aaKnown RBP eCLIP22.07■■□□□ 1.12
SHF-201ENST00000290894 IQCA1Q86XH1 822 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 OXER1Q8TDS5 423 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 PIBF1Q8WXW3 757 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 XDHP47989 1333 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 STK36Q9NRP7 1315 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 BIN1O00499 593 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 CTAGE5O15320 804 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 UFL1O94874 794 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 MMP1P03956 469 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 LDHBP07195 334 aaKnown RBP22.06■■□□□ 1.12
SHF-201ENST00000290894 SPECC1Q5M775 1068 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 MAP3K14Q99558 947 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 PODXL2Q9NZ53 605 aa22.06■■□□□ 1.12
SHF-201ENST00000290894 ZNF202O95125 648 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 PTPAQ15257 358 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 NOSTRINQ8IVI9 506 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 TRIM5Q9C035 493 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 CCDC88AQ3V6T2 1871 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 UBR3Q6ZT12 1888 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 CCDC196A0A1B0GTZ2 297 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 STX1AQ16623 288 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 KLHL34Q8N239 644 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 SH3RF3Q8TEJ3 882 aaPredicted RBP22.05■■□□□ 1.12
SHF-201ENST00000290894 SHISA4Q96DD7 197 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 VPS54Q9P1Q0 977 aa22.05■■□□□ 1.12
SHF-201ENST00000290894 ZNF500O60304 480 aaPredicted RBP22.04■■□□□ 1.12
SHF-201ENST00000290894 DEXIO95424 95 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 DDR1Q08345 913 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 ISM2Q6H9L7 571 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 DYNLL2Q96FJ2 89 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 MYH6P13533 1939 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 KRT27Q7Z3Y8 459 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 CATIPQ7Z7H3 387 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 WASF1Q92558 559 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 LEMD3Q9Y2U8 911 aa22.04■■□□□ 1.12
SHF-201ENST00000290894 PDS5AQ29RF7 1337 aaKnown RBP22.04■■□□□ 1.12
SHF-201ENST00000290894 ADRA2BP18089 450 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 USP5P45974 858 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 TOB1P50616 345 aaPredicted RBP22.03■■□□□ 1.12
SHF-201ENST00000290894 ST5P78524 1137 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 SAFBQ15424 915 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHF-201ENST00000290894 SHC4Q6S5L8 630 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 TDRD7Q8NHU6 1098 aaKnown RBP22.03■■□□□ 1.12
SHF-201ENST00000290894 V9GY48 417 aaPredicted RBP22.03■■□□□ 1.12
SHF-201ENST00000290894 NID2Q14112 1375 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 IQCB1Q15051 598 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 ATP8A2Q9NTI2 1148 aa22.03■■□□□ 1.12
SHF-201ENST00000290894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.03■■□□□ 1.12
SHF-201ENST00000290894 FAM205CA6NFA0 338 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms