RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 CEP120Q8N960 986 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 SKA1Q96BD8 255 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 SPINK5Q9NQ38 1064 aaPredicted RBP4.88□□□□□ -1.63
NCOA1-201ENST00000288599 FAN1Q9Y2M0 1017 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 FARP1Q9Y4F1 1045 aaPredicted RBP4.88□□□□□ -1.63
NCOA1-201ENST00000288599 A0A1W2PRG0 241 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 PPARGP37231 505 aaPredicted RBP4.88□□□□□ -1.63
NCOA1-201ENST00000288599 IRX4P78413 519 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 OCRLQ01968 901 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 CACNB1Q02641 598 aaPredicted RBP4.88□□□□□ -1.63
NCOA1-201ENST00000288599 RCSD1Q6JBY9 416 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 SULF1Q8IWU6 871 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 BBS5Q8N3I7 341 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 NLRP7Q8WX94 980 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.88□□□□□ -1.63
NCOA1-201ENST00000288599 AZI2Q9H6S1 392 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 EXO5Q9H790 373 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 CCDC87Q9NVE4 849 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 CLCA2Q9UQC9 943 aa4.88□□□□□ -1.63
NCOA1-201ENST00000288599 KRT87PA6NCN2 255 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 SMCO2A6NFE2 343 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 E7EVH7 732 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NEMP1O14524 444 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 URI1O94763 535 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NUP62P37198 522 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 GPR1P46091 355 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 CC2D1AQ6P1N0 951 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TRMT2AQ8IZ69 625 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 EHBP1Q8NDI1 1231 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 FBXO18Q8NFZ0 1043 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ENOX1Q8TC92 643 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 DDX27Q96GQ7 796 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TRIM56Q9BRZ2 755 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 MED10Q9BTT4 135 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 CUEDC2Q9H467 287 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 STN1Q9H668 368 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 DNAJC11Q9NVH1 559 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 BAG5Q9UL15 447 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 KCNH4Q9UQ05 1017 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 CCDC85CA6NKD9 419 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 IGSF3O75054 1194 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 MYL1P05976 194 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 PRPF4BQ13523 1007 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 HLTFQ14527 1009 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ARMC6Q6NXE6 501 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 BCS1LQ9Y276 419 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 MROH2AA6NES4 1674 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ZC3H13Q5T200 1668 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 PIK3C2BO00750 1634 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ERBINQ96RT1 1412 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 SFI1A8K8P3 1242 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 PI4K2BG5E9Z4 385 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TCF3P15923 654 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 AKT1P31749 480 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 RECQLP46063 649 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NRG3P56975 720 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 UBXN2AP68543 259 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ODR4Q5SWX8 454 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TCERG1LQ5VWI1 586 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 SND1Q7KZF4 910 aaKnown RBP eCLIP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 WDR66Q8TBY9 1149 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 PI4K2BQ8TCG2 481 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ABHD8Q96I13 439 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 RSPH14Q9UHP6 348 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 BRD4O60885 1362 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ROCK2O75116 1388 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 SIGLEC1Q9BZZ2 1709 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TMEM247A6NEH6 219 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 POLR2BP30876 1174 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NNMTP40261 264 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 LRMPQ12912 555 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ARHGAP29Q52LW3 1261 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 PRR16Q569H4 304 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 CHMP1BQ7LBR1 199 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NBPF11Q86T75 865 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 LRRC27Q9C0I9 530 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 HEMK1Q9Y5R4 338 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 POGZQ7Z3K3 1410 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ASIC1P78348 528 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 IQCB1Q15051 598 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 MTERF2Q49AM1 385 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ZBTB41Q5SVQ8 909 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ZKSCAN2Q63HK3 967 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ATL3Q6DD88 541 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 NSUN7Q8NE18 718 aaKnown RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ZFP42Q96MM3 310 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 TEX12Q9BXU0 123 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 UBN1Q9NPG3 1134 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 DYRK4Q9NR20 520 aa4.87□□□□□ -1.63
NCOA1-201ENST00000288599 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
NCOA1-201ENST00000288599 RRP9O43818 475 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 KIF5BP33176 963 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 FKBP4Q02790 459 aaKnown RBP eCLIP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CC2D2BQ6DHV5 1058 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 KLHL10Q6JEL2 608 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SIX6OS1Q8N1H7 587 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 SPAG5Q96R06 1193 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 CTAGE1Q96RT6 745 aa4.86□□□□□ -1.63
NCOA1-201ENST00000288599 DDX50Q9BQ39 737 aaKnown RBP4.86□□□□□ -1.63
NCOA1-201ENST00000288599 FOXP3Q9BZS1 431 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms