RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 LCORLQ8N3X6 602 aa30.35■■■□□ 2.45
PDF-201ENST00000288022 CRACR2BQ8N4Y2 399 aaPredicted RBP30.35■■■□□ 2.45
PDF-201ENST00000288022 ARMT1Q9H993 441 aa30.35■■■□□ 2.45
PDF-201ENST00000288022 PICK1Q9NRD5 415 aa30.35■■■□□ 2.45
PDF-201ENST00000288022 HERC5Q9UII4 1024 aaKnown RBP30.35■■■□□ 2.45
PDF-201ENST00000288022 SALL3Q9BXA9 1300 aa30.35■■■□□ 2.45
PDF-201ENST00000288022 MBD4O95243 580 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 PPATQ06203 517 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 PPIL2Q13356 520 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 IFNL1Q8IU54 200 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 SCYL3Q8IZE3 742 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 MYH1P12882 1939 aa30.34■■■□□ 2.45
PDF-201ENST00000288022 CTNND1O60716 968 aaKnown RBP30.33■■■□□ 2.45
PDF-201ENST00000288022 CHD1LQ86WJ1 897 aa30.33■■■□□ 2.45
PDF-201ENST00000288022 CCL15-CCL14A0A0B4J2E2 113 aa30.32■■■□□ 2.44
PDF-201ENST00000288022 IRF6O14896 467 aa30.32■■■□□ 2.44
PDF-201ENST00000288022 PDE1AP54750 535 aa30.32■■■□□ 2.44
PDF-201ENST00000288022 CCL15Q16663 113 aa30.32■■■□□ 2.44
PDF-201ENST00000288022 MS4A4AQ96JQ5 239 aa30.32■■■□□ 2.44
PDF-201ENST00000288022 DOCK1Q14185 1865 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 SIPA1L1O43166 1804 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 IGF2BP3O00425 579 aaKnown RBP eCLIP30.31■■■□□ 2.44
PDF-201ENST00000288022 TBC1D8O95759 1140 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 ALDH1A1P00352 501 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 NUCB1Q02818 461 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 SNAPC2Q13487 334 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 LRRFIP1Q32MZ4 808 aaKnown RBP30.31■■■□□ 2.44
PDF-201ENST00000288022 OTUD7BQ6GQQ9 843 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 FOXP4Q8IVH2 680 aaPredicted RBP30.31■■■□□ 2.44
PDF-201ENST00000288022 STAP2Q9UGK3 403 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 NAV1Q8NEY1 1877 aa30.31■■■□□ 2.44
PDF-201ENST00000288022 SDR42E1Q8WUS8 393 aa30.3■■■□□ 2.44
PDF-201ENST00000288022 FSD1Q9BTV5 496 aa30.3■■■□□ 2.44
PDF-201ENST00000288022 TESPA1A2RU30 521 aaPredicted RBP30.29■■■□□ 2.44
PDF-201ENST00000288022 RNF113AO15541 343 aaKnown RBP30.29■■■□□ 2.44
PDF-201ENST00000288022 ZFYP08048 801 aaPredicted RBP30.29■■■□□ 2.44
PDF-201ENST00000288022 CETPP11597 493 aa30.29■■■□□ 2.44
PDF-201ENST00000288022 TTC6Q86TZ1 520 aa30.29■■■□□ 2.44
PDF-201ENST00000288022 BRI3BPQ8WY22 251 aa30.29■■■□□ 2.44
PDF-201ENST00000288022 PUS7LQ9H0K6 701 aaKnown RBP30.29■■■□□ 2.44
PDF-201ENST00000288022 MCM9Q9NXL9 1143 aa30.29■■■□□ 2.44
PDF-201ENST00000288022 POLR3DP05423 398 aaPredicted RBP30.28■■■□□ 2.44
PDF-201ENST00000288022 PTPRAP18433 802 aa30.28■■■□□ 2.44
PDF-201ENST00000288022 PTPN18Q99952 460 aa30.28■■■□□ 2.44
PDF-201ENST00000288022 ZHX2Q9Y6X8 837 aa30.28■■■□□ 2.44
PDF-201ENST00000288022 PRKAB2O43741 272 aa30.27■■■□□ 2.44
PDF-201ENST00000288022 APPBP2Q92624 585 aa30.27■■■□□ 2.44
PDF-201ENST00000288022 CAP2P40123 477 aa30.26■■■□□ 2.43
PDF-201ENST00000288022 DDX60LQ5H9U9 1706 aaKnown RBP30.26■■■□□ 2.43
PDF-201ENST00000288022 DNAJC18Q9H819 358 aa30.26■■■□□ 2.43
PDF-201ENST00000288022 DCP1AQ9NPI6 582 aaPredicted RBP30.26■■■□□ 2.43
PDF-201ENST00000288022 FRMD4AQ9P2Q2 1039 aaPredicted RBP30.26■■■□□ 2.43
PDF-201ENST00000288022 METTL16Q86W50 562 aaKnown RBP30.25■■■□□ 2.43
PDF-201ENST00000288022 DDRGK1Q96HY6 314 aa30.25■■■□□ 2.43
PDF-201ENST00000288022 ATP8A2Q9NTI2 1148 aa30.25■■■□□ 2.43
PDF-201ENST00000288022 SERPINB13Q9UIV8 391 aa30.25■■■□□ 2.43
PDF-201ENST00000288022 KCNH4Q9UQ05 1017 aa30.25■■■□□ 2.43
PDF-201ENST00000288022 SLC4A4Q9Y6R1 1079 aa30.25■■■□□ 2.43
PDF-201ENST00000288022 ATAD5Q96QE3 1844 aa30.24■■■□□ 2.43
PDF-201ENST00000288022 RRP1BQ14684 758 aaKnown RBP30.24■■■□□ 2.43
PDF-201ENST00000288022 CCDC84Q86UT8 332 aaPredicted RBP30.24■■■□□ 2.43
PDF-201ENST00000288022 TNS4Q8IZW8 715 aa30.24■■■□□ 2.43
PDF-201ENST00000288022 OSBP2Q969R2 916 aa30.24■■■□□ 2.43
PDF-201ENST00000288022 EHD4Q9H223 541 aa30.24■■■□□ 2.43
PDF-201ENST00000288022 EVI5LQ96CN4 794 aa30.23■■■□□ 2.43
PDF-201ENST00000288022 CXCL11O14625 94 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 PLCD1P51178 756 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 FAM43AQ8N2R8 423 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 CFHR5Q9BXR6 569 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 AFG3L2Q9Y4W6 797 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 CASP8AP2Q9UKL3 1982 aa30.22■■■□□ 2.43
PDF-201ENST00000288022 GDF11O95390 407 aa30.21■■■□□ 2.43
PDF-201ENST00000288022 PLEKHM2Q8IWE5 1019 aa30.21■■■□□ 2.43
PDF-201ENST00000288022 AMOTL1Q8IY63 956 aa30.21■■■□□ 2.43
PDF-201ENST00000288022 STRBPQ96SI9 672 aaKnown RBP30.21■■■□□ 2.43
PDF-201ENST00000288022 R3HDMLQ9H3Y0 253 aa30.21■■■□□ 2.43
PDF-201ENST00000288022 TRIM75PA6NK02 468 aa30.2■■■□□ 2.43
PDF-201ENST00000288022 TRIM6-TRIM34B2RNG4 842 aa30.2■■■□□ 2.43
PDF-201ENST00000288022 BTBD19C9JJ37 291 aa30.2■■■□□ 2.43
PDF-201ENST00000288022 GPR25O00155 361 aa30.2■■■□□ 2.43
PDF-201ENST00000288022 CRHR2Q13324 411 aa30.2■■■□□ 2.43
PDF-201ENST00000288022 TAF1CQ15572 869 aaPredicted RBP30.2■■■□□ 2.43
PDF-201ENST00000288022 USP17L5A8MUK1 530 aa30.19■■■□□ 2.42
PDF-201ENST00000288022 M0R2C6 588 aa30.19■■■□□ 2.42
PDF-201ENST00000288022 ASNSP08243 561 aa30.19■■■□□ 2.42
PDF-201ENST00000288022 CYP2D6P10635 497 aa30.19■■■□□ 2.42
PDF-201ENST00000288022 PHIPQ8WWQ0 1821 aa30.19■■■□□ 2.42
PDF-201ENST00000288022 GPAA1O43292 621 aa30.18■■■□□ 2.42
PDF-201ENST00000288022 ZNF296Q8WUU4 475 aaPredicted RBP30.18■■■□□ 2.42
PDF-201ENST00000288022 AS3MTQ9HBK9 375 aa30.18■■■□□ 2.42
PDF-201ENST00000288022 BAZ2AQ9UIF9 1905 aaKnown RBP30.18■■■□□ 2.42
PDF-201ENST00000288022 EVX2Q03828 476 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 TATDN1Q6P1N9 297 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 GADL1Q6ZQY3 521 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 RILPL2Q969X0 211 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 SEC62Q99442 399 aaKnown RBP30.17■■■□□ 2.42
PDF-201ENST00000288022 TBC1D2Q9BYX2 928 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 ZFYVE28Q9HCC9 887 aa30.17■■■□□ 2.42
PDF-201ENST00000288022 A0A0G2JLL6 359 aaPredicted RBP30.16■■■□□ 2.42
PDF-201ENST00000288022 USP17L12C9JPN9 530 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms