RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 CNKSR1Q969H4 720 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 PIH1D3Q9NQM4 214 aaKnown RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 PIM2Q9P1W9 311 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 CFAP45Q9UL16 551 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF532Q9HCE3 1301 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 LAMA4Q16363 1823 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 CCDC189A1A4V9 331 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 SYCE3A1L190 88 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 FIBPO43427 364 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 DNM1Q05193 864 aaKnown RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 GABPB1Q06547 395 aaPredicted RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 CHRNDQ07001 517 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 SLFNL1Q499Z3 407 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 CDC37L1Q7L3B6 337 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF771Q7L3S4 317 aaPredicted RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 ZSCAN30Q86W11 494 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 SP8Q8IXZ3 490 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 TSPY26PQ9H489 355 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 RBM27Q9P2N5 1060 aaKnown RBP8.76□□□□□ -1.01
TRIM42-201ENST00000286349 ATP6V0A2Q9Y487 856 aa8.76□□□□□ -1.01
TRIM42-201ENST00000286349 UQCRHLA0A096LP55 91 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 TCRBV5S4A2TA0A5A2 114 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 FOXP2O15409 715 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 C21orf2O43822 256 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 IPO7O95373 1038 aaKnown RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 UQCRHP07919 91 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 NOP2P46087 812 aaKnown RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 GPSM2P81274 684 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 C11orf91Q3C1V1 193 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF280DQ6N043 979 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 PI16Q6UXB8 463 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 MB21D2Q8IYB1 491 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 JMYQ8N9B5 988 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 PPP1R9BQ96SB3 815 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 NACAP1Q9BZK3 213 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 GDPD2Q9HCC8 539 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 DOCK2Q92608 1830 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 SNED1Q8TER0 1413 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 SEMA3EO15041 775 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 PRC1O43663 620 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 GADD45BO75293 160 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 GUCY2CP25092 1073 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 TNNT3P45378 269 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 APOBRQ0VD83 1088 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 RASGRF1Q13972 1273 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 CAVIN4Q5BKX8 364 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 APBB1IPQ7Z5R6 666 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 CHAMP1Q96JM3 812 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 TMEM87BQ96K49 555 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 SUDS3Q9H7L9 328 aaPredicted RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 CNNM2Q9H8M5 875 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 NSFL1CQ9UNZ2 370 aaKnown RBP8.75□□□□□ -1.01
TRIM42-201ENST00000286349 RPS6KL1Q9Y6S9 549 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 SLX4Q8IY92 1834 aa8.75□□□□□ -1.01
TRIM42-201ENST00000286349 SALL1Q9NSC2 1324 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 PTPDC1A2A3K4 754 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 GOLGA6L4A6NEF3 574 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 COL9A3Q14050 684 aaPredicted RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 DALRD3Q5D0E6 543 aaKnown RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 LRCH2Q5VUJ6 765 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 ICE2Q659A1 982 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 TTLL5Q6EMB2 1281 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 STRBPQ96SI9 672 aaKnown RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 POLLQ9UGP5 575 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF804BA4D1E1 1349 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 PDS5AQ29RF7 1337 aaKnown RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 IRS2Q9Y4H2 1338 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 CDKL5O76039 1030 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 YBX3P16989 372 aaKnown RBP eCLIP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 MSNP26038 577 aaKnown RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 KLRK1P26718 216 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 MAGEB6Q8N7X4 407 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 SPATA32Q96LK8 384 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 GPR101Q96P66 508 aaPredicted RBP8.74□□□□□ -1.01
TRIM42-201ENST00000286349 LRRC2Q9BYS8 371 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 ANKRD2Q9GZV1 360 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 KDM4CQ9H3R0 1056 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 DENND2AQ9ULE3 1009 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 BCS1LQ9Y276 419 aa8.74□□□□□ -1.01
TRIM42-201ENST00000286349 TPD52L2O43399 206 aaKnown RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 JAK2O60674 1132 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 PRELPP51888 382 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 RESTQ13127 1097 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 HS1BP3Q53T59 392 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 CPLX2Q6PUV4 134 aaKnown RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 KRBA2Q6ZNG9 492 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 TXNRD3Q86VQ6 643 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 ZNF396Q96N95 335 aaPredicted RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 KRT23Q9C075 422 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 NAPBQ9H115 298 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
TRIM42-201ENST00000286349 CD151P48509 253 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 HAND2P61296 217 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 ATL2Q8NHH9 583 aa8.73□□□□□ -1.01
TRIM42-201ENST00000286349 CXorf38Q8TB03 319 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms