RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 PRIMPOLQ96LW4 560 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 SDF4Q9BRK5 362 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 SLC26A6Q9BXS9 759 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 ANKRD2Q9GZV1 360 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 FOXP1Q9H334 677 aaPredicted RBP8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 ABCF2Q9UG63 623 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 WTIPA6NIX2 430 aaPredicted RBP8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 RPS8P62241 208 aaKnown RBP8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 SHC4Q6S5L8 630 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 FANCBQ8NB91 859 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 SETDB2Q96T68 719 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 TUBE1Q9UJT0 475 aa8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 IQSEC3Q9UPP2 1182 aaPredicted RBP8.38□□□□□ -1.07
SPARCL1-201ENST00000282470 CUTAO60888 179 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 PTF1AQ7RTS3 328 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 CCDC186Q7Z3E2 898 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 NSUN4Q96CB9 384 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 NLRP3Q96P20 1036 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 UBAC1Q9BSL1 405 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 RNF26Q9BY78 433 aaPredicted RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 CLIP2Q9UDT6 1046 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 TNKSO95271 1327 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 BECN2A8MW95 431 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 UBE2Q2LH0YL09 131 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 SLC3A2P08195 630 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 GUCY1A2P33402 732 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 NLRP12P59046 1061 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 PIP4K2BP78356 416 aa8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 GNL2Q13823 731 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 RRP12Q5JTH9 1297 aaKnown RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 ZSCAN10Q96SZ4 725 aaPredicted RBP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.37□□□□□ -1.07
SPARCL1-201ENST00000282470 DYNC1I1O14576 645 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 ORC4O43929 436 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 NEMFO60524 1076 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 MARCKSP29966 332 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 TM4SF1P30408 202 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 GTF2F1P35269 517 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 NT5C2P49902 561 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 FUT2Q10981 343 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 SAFBQ15424 915 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 DPCR1Q3MIW9 517 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 RILPL1Q5EBL4 403 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 NBPF5PQ86XG9 351 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 C17orf53Q8N3J3 647 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 ENAHQ8N8S7 591 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 NGLY1Q96IV0 654 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 ZKSCAN3Q9BRR0 538 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 SRP68Q9UHB9 627 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 NRBP1Q9UHY1 535 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 UQCRHLA0A096LP55 91 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 GNPATO15228 680 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 ZPR1O75312 459 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 UQCRHP07919 91 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 SYKP43405 635 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 TOB1P50616 345 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 KCNQ4P56696 695 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 DYNLL1P63167 89 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 MECOMQ03112 1051 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 CTR9Q6PD62 1173 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 TPTE2Q6XPS3 522 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 BICDL1Q6ZP65 573 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 DIS3L2Q8IYB7 885 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 AOPEPQ8N6M6 819 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 MYRIPQ8NFW9 859 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 C8orf37Q96NL8 207 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 TOMM22Q9NS69 142 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 MINDY4BA8MYZ0 360 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 IKBKBO14920 756 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 KLRK1P26718 216 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 HIBADHP31937 336 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 CCDC144BQ3MJ40 725 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 SBK1Q52WX2 424 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 DRC7Q8IY82 874 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 KRI1Q8N9T8 703 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 ERCC4Q92889 916 aaPredicted RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 RBM28Q9NW13 759 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 RTCBQ9Y3I0 505 aaKnown RBP8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 SPATA31A6Q5VVP1 1343 aa8.36□□□□□ -1.07
SPARCL1-201ENST00000282470 UBR3Q6ZT12 1888 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 A0A087WWV3 80 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 BTBD18B2RXH4 712 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 RRP9O43818 475 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 DDAH1O94760 285 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CALM1P0DP23 149 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CALM2P0DP24 149 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CALM3P0DP25 149 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 ZNF579Q8NAF0 562 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 NOL10Q9BSC4 688 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 ATP8A2Q9NTI2 1148 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 CCNL1Q9UK58 526 aaPredicted RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 DDX60LQ5H9U9 1706 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 PRPF3O43395 683 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 TROAPQ12815 778 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 NCAPHQ15003 741 aa8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 ZRSR1Q15695 479 aaKnown RBP8.35□□□□□ -1.07
SPARCL1-201ENST00000282470 PKN1Q16512 942 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms