RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 USP40Q9NVE5 1235 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 ANGEL1Q9UNK9 670 aaKnown RBP13.78□□□□□ -0.2
SSRP1-201ENST00000278412 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 FDPSP14324 419 aaKnown RBP13.78□□□□□ -0.2
SSRP1-201ENST00000278412 GSTO1P78417 241 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 C12orf60Q5U649 245 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 PHKBQ93100 1093 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 ATP8A2Q9NTI2 1148 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 CIZ1Q9ULV3 898 aaPredicted RBP13.78□□□□□ -0.2
SSRP1-201ENST00000278412 MTMR7Q9Y216 660 aa13.78□□□□□ -0.2
SSRP1-201ENST00000278412 PTPDC1A2A3K4 754 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.2
SSRP1-201ENST00000278412 BAG3O95817 575 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 EGFRP00533 1210 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 STRIP1Q5VSL9 837 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 APOA5Q6Q788 366 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 CDAN1Q8IWY9 1227 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 ENAHQ8N8S7 591 aaPredicted RBP13.77□□□□□ -0.2
SSRP1-201ENST00000278412 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.2
SSRP1-201ENST00000278412 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.2
SSRP1-201ENST00000278412 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.77□□□□□ -0.2
SSRP1-201ENST00000278412 TNKSO95271 1327 aa13.77□□□□□ -0.2
SSRP1-201ENST00000278412 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 TGFB2P61812 414 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 MCTP1Q6DN14 999 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 PRMT6Q96LA8 375 aaPredicted RBP13.77□□□□□ -0.21
SSRP1-201ENST00000278412 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
SSRP1-201ENST00000278412 ANAPC4Q9UJX5 808 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 MTMR6Q9Y217 621 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 MYH1P12882 1939 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.21
SSRP1-201ENST00000278412 LAMB1P07942 1786 aa13.77□□□□□ -0.21
SSRP1-201ENST00000278412 STX6O43752 255 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 LDHCP07864 332 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 FAM163AQ96GL9 167 aaPredicted RBP13.76□□□□□ -0.21
SSRP1-201ENST00000278412 NOL10Q9BSC4 688 aaKnown RBP13.76□□□□□ -0.21
SSRP1-201ENST00000278412 FHDC1Q9C0D6 1143 aaPredicted RBP13.76□□□□□ -0.21
SSRP1-201ENST00000278412 IL17RBQ9NRM6 502 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.76□□□□□ -0.21
SSRP1-201ENST00000278412 DDX60LQ5H9U9 1706 aaKnown RBP13.76□□□□□ -0.21
SSRP1-201ENST00000278412 CLRN2A0PK11 232 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 RTKN2Q8IZC4 609 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 NUP133Q8WUM0 1156 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 PSMD1Q99460 953 aa13.76□□□□□ -0.21
SSRP1-201ENST00000278412 ZBTB22O15209 634 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 CXCL9Q07325 125 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 SEC23AQ15436 765 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 LARP1BQ659C4 914 aaKnown RBP13.75□□□□□ -0.21
SSRP1-201ENST00000278412 IARSP41252 1262 aaKnown RBP13.75□□□□□ -0.21
SSRP1-201ENST00000278412 EVCP57679 992 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 KRT23Q9C075 422 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 GZF1Q9H116 711 aaPredicted RBP13.75□□□□□ -0.21
SSRP1-201ENST00000278412 TAOK3Q9H2K8 898 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 ARPP21Q9UBL0 812 aaPredicted RBP13.75□□□□□ -0.21
SSRP1-201ENST00000278412 FER1L6Q2WGJ9 1857 aa13.75□□□□□ -0.21
SSRP1-201ENST00000278412 GUCY1A2P33402 732 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 TFAP4Q01664 338 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 SH3BP5LQ7L8J4 393 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-201ENST00000278412 FAM198AQ9UFP1 575 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 DDTLA6NHG4 134 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-201ENST00000278412 NUCB2P80303 420 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 WTAPQ15007 396 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 CFAP100Q494V2 611 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 SBK1Q52WX2 424 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 GIMAP6Q6P9H5 292 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 PIBF1Q8WXW3 757 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 ESR2Q92731 530 aa13.74□□□□□ -0.21
SSRP1-201ENST00000278412 ASTN2O75129 1339 aaPredicted RBP13.74□□□□□ -0.21
SSRP1-201ENST00000278412 FGRP09769 529 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 RASA1P20936 1047 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 EIF6P56537 245 aaKnown RBP13.73□□□□□ -0.21
SSRP1-201ENST00000278412 CC2D2BQ6DHV5 1058 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 RCSD1Q6JBY9 416 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
SSRP1-201ENST00000278412 UBAC1Q9BSL1 405 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 CNNM2Q9H8M5 875 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 TSPY2A6NKD2 308 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 ZSCAN22P10073 491 aaPredicted RBP13.73□□□□□ -0.21
SSRP1-201ENST00000278412 CDK8P49336 464 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 METAP2P50579 478 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 12.3
SSRP1-201ENST00000278412 SMARCC2Q8TAQ2 1214 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 FTOQ9C0B1 505 aaKnown RBP eCLIP13.73□□□□□ -0.217e-8■■■■■ 31.6
SSRP1-201ENST00000278412 CPVLQ9H3G5 476 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 CNPY2Q9Y2B0 182 aa13.73□□□□□ -0.21
SSRP1-201ENST00000278412 ZBTB43O43298 467 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 RBM26Q5T8P6 1007 aaKnown RBP13.72□□□□□ -0.21
SSRP1-201ENST00000278412 RSBN1LQ6PCB5 846 aaPredicted RBP13.72□□□□□ -0.21
SSRP1-201ENST00000278412 ZDHHC15Q96MV8 337 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 RNF41Q9H4P4 317 aaPredicted RBP13.72□□□□□ -0.21
SSRP1-201ENST00000278412 DNAJC18Q9H819 358 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 SLC12A7Q9Y666 1083 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 GOLGA8AA7E2F4 631 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 VEGFAP15692 232 aaPredicted RBP13.72□□□□□ -0.21
SSRP1-201ENST00000278412 DNM1Q05193 864 aaKnown RBP13.72□□□□□ -0.21
SSRP1-201ENST00000278412 NIM1KQ8IY84 436 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 FBXL16Q8N461 479 aa13.72□□□□□ -0.21
SSRP1-201ENST00000278412 SUPT20HQ8NEM7 779 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms