RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 EP400NLQ6ZTU2 488 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 KRT222Q8N1A0 295 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 SNX29Q8TEQ0 813 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 FAM204AQ9H8W3 233 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 FRMPD2Q68DX3 1309 aaPredicted RBP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 MNAT1P51948 309 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 RDH13Q8NBN7 331 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 BCS1LQ9Y276 419 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 DYNC1I1O14576 645 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 GTF2IP78347 998 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 INF2Q27J81 1249 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 TTC38Q5R3I4 469 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 CNNM4Q6P4Q7 775 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 IGSF22Q8N9C0 903 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 WDR66Q8TBY9 1149 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 NAP1L4Q99733 375 aaKnown RBP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 TSGA10Q9BZW7 698 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 ADCY7P51828 1080 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 ANKS4BQ8N8V4 417 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 TRIM31Q9BZY9 425 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 BLZF1Q9H2G9 400 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 MTRF1LQ9UGC7 380 aaKnown RBP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 SNX14Q9Y5W7 946 aa13.28□□□□□ -0.28
SHPRH-201ENST00000275233 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
SHPRH-201ENST00000275233 PTPRKQ15262 1439 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 ZBTB7BO15156 539 aaPredicted RBP13.27□□□□□ -0.28
SHPRH-201ENST00000275233 FAM160A1Q05DH4 1040 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 UTP14CQ5TAP6 766 aaKnown RBP13.27□□□□□ -0.28
SHPRH-201ENST00000275233 APPBP2Q92624 585 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 AZI2Q9H6S1 392 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 ANGEL1Q9UNK9 670 aaKnown RBP13.27□□□□□ -0.28
SHPRH-201ENST00000275233 MYL5Q02045 173 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 CALCOCO2Q13137 446 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 CALCRLQ16602 461 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 DOK7Q18PE1 504 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 BRDTQ58F21 947 aaPredicted RBP13.27□□□□□ -0.28
SHPRH-201ENST00000275233 CPLX4Q7Z7G2 160 aa13.27□□□□□ -0.28
SHPRH-201ENST00000275233 HAUS3Q68CZ6 603 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 CSGALNACT2Q8N6G5 542 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 LRMPQ12912 555 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 TMEM87BQ96K49 555 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 PSMB7Q99436 277 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 TRIM7Q9C029 511 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 PFDN4Q9NQP4 134 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 PNMA6EA0A0J9YXQ4 647 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 CCT6BQ92526 530 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 BEGAINQ9BUH8 593 aa13.27□□□□□ -0.29
SHPRH-201ENST00000275233 MRPL44Q9H9J2 332 aaKnown RBP13.27□□□□□ -0.29
SHPRH-201ENST00000275233 TCP10L2B9ZVM9 353 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 HGSO14964 777 aaPredicted RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 METTL13Q8N6R0 699 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SMCR8Q8TEV9 937 aaPredicted RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SCNN1DP51172 638 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SF3A3Q12874 501 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 RAD50Q92878 1312 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SYNRGQ9UMZ2 1314 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 CAPN2P17655 700 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 HPDP32754 393 aaPredicted RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 IRX3P78415 501 aaPredicted RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 FAM47CQ5HY64 1035 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 TPH2Q8IWU9 490 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 DIS3L2Q8IYB7 885 aaKnown RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 RNF169Q8NCN4 708 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 LPIN2Q92539 896 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 VPS54Q9P1Q0 977 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 TNNC1P63316 161 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 EDC3Q96F86 508 aaKnown RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 GTPBP4Q9BZE4 634 aaKnown RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 ZFYVE9O95405 1425 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 HERC4Q5GLZ8 1057 aaPredicted RBP13.26□□□□□ -0.29
SHPRH-201ENST00000275233 SPATA24Q86W54 205 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 MYO1AQ9UBC5 1043 aa13.26□□□□□ -0.29
SHPRH-201ENST00000275233 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
SHPRH-201ENST00000275233 CCDC121Q6ZUS5 278 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 ANAPC4Q9UJX5 808 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 RFX1P22670 979 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 TFAP4Q01664 338 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 GPR162Q16538 588 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 CNGA4Q8IV77 575 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 MAST3O60307 1309 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 RILPL1Q5EBL4 403 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 VAV2P52735 878 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 MICALL1Q8N3F8 863 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 TTF2Q9UNY4 1162 aaKnown RBP13.25□□□□□ -0.29
SHPRH-201ENST00000275233 DNM3Q9UQ16 869 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 LRWD1Q9UFC0 647 aa13.25□□□□□ -0.29
SHPRH-201ENST00000275233 IL13P35225 146 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 KIAA1524Q8TCG1 905 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 TAB2Q9NYJ8 693 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 CNGA1P29973 690 aa13.24□□□□□ -0.29
SHPRH-201ENST00000275233 ARHGAP44Q17R89 818 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms