RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 IKBKBO14920 756 aa14.57□□□□□ -0.08
HERC6-202ENST00000273960 KCNJ6P48051 423 aa14.57□□□□□ -0.08
HERC6-202ENST00000273960 FKBP4Q02790 459 aaKnown RBP eCLIP14.57□□□□□ -0.08
HERC6-202ENST00000273960 GRIN1Q05586 938 aa14.57□□□□□ -0.08
HERC6-202ENST00000273960 ZNF790Q6PG37 636 aa14.57□□□□□ -0.08
HERC6-202ENST00000273960 CEP57Q86XR8 500 aa14.57□□□□□ -0.08
HERC6-202ENST00000273960 A0A1W2PQ27 194 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 A0A1W2PQ64 194 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 A0A1W2PQD8 194 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 GRM8O00222 908 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 GNGT1P63211 74 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 STIM1Q13586 685 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 IFNL2Q8IZJ0 200 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 EEF2KMTQ96G04 330 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 DENND2AQ9ULE3 1009 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 POLR2DO15514 142 aaKnown RBP14.56□□□□□ -0.08
HERC6-202ENST00000273960 GBP6Q6ZN66 633 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 ANKRD26Q9UPS8 1709 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 GOLGA6CA6NDK9 693 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 GOLGA6DP0CG33 693 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 CPLX2Q6PUV4 134 aaKnown RBP14.56□□□□□ -0.08
HERC6-202ENST00000273960 CCDC148Q8NFR7 591 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 LLPHQ9BRT6 129 aaKnown RBP14.56□□□□□ -0.08
HERC6-202ENST00000273960 GOLGA6AQ9NYA3 693 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 KCNH3Q9ULD8 1083 aa14.56□□□□□ -0.08
HERC6-202ENST00000273960 SYF2O95926 243 aaKnown RBP14.55□□□□□ -0.08
HERC6-202ENST00000273960 CMA1P23946 247 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 DNA2P51530 1060 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 SETQ01105 290 aaPredicted RBP14.55□□□□□ -0.08
HERC6-202ENST00000273960 MICU3Q86XE3 530 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 FAM76AQ8TAV0 307 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 KAZALD1Q96I82 304 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 CLGNO14967 610 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 SLC9C2Q5TAH2 1124 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 NAPGQ99747 312 aaPredicted RBP14.55□□□□□ -0.08
HERC6-202ENST00000273960 BPIFA3Q9BQP9 254 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 MAPK8IP1Q9UQF2 711 aa14.55□□□□□ -0.08
HERC6-202ENST00000273960 USP42Q9H9J4 1324 aaKnown RBP14.55□□□□□ -0.08
HERC6-202ENST00000273960 ARHGAP23Q9P227 1491 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 KCNV1Q6PIU1 500 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 NUP88Q99567 741 aaPredicted RBP14.54□□□□□ -0.08
HERC6-202ENST00000273960 ALG1Q9BT22 464 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 VPS16Q9H269 839 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 SERTAD1Q9UHV2 236 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 SETD1AO15047 1707 aaKnown RBP14.54□□□□□ -0.08
HERC6-202ENST00000273960 ZNF609O15014 1411 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 ANKARQ7Z5J8 1434 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 ADGRL3Q9HAR2 1447 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 EIF5P55010 431 aaKnown RBP14.54□□□□□ -0.08
HERC6-202ENST00000273960 KSR2Q6VAB6 950 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 MYBL2P10244 700 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 PDCLQ13371 301 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 VPS37DQ86XT2 251 aa14.54□□□□□ -0.08
HERC6-202ENST00000273960 SHTN1A0MZ66 631 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 PRC1O43663 620 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 RDXP35241 583 aaKnown RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 A0A087WZG4 1122 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 ZNF185O15231 689 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 SH2D3CQ8N5H7 860 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 GBP3Q9H0R5 595 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 MAN1B1Q9UKM7 699 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 MYO6Q9UM54 1294 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 PEAK1Q9H792 1746 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 NUTM2BA6NNL0 878 aaPredicted RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 NUTM2EB1AL46 878 aaPredicted RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 NDUFAB1O14561 156 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 ADAMTS2O95450 1211 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 YEATS4O95619 227 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 KIF23Q02241 960 aaPredicted RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 FCHSD1Q86WN1 690 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 NUTM2AQ8IVF1 878 aaPredicted RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 CMTR1Q8N1G2 835 aaKnown RBP14.53□□□□□ -0.08
HERC6-202ENST00000273960 MMS19Q96T76 1030 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 SLIT1O75093 1534 aa14.53□□□□□ -0.08
HERC6-202ENST00000273960 KIAA0754O94854 1291 aa14.52□□□□□ -0.08
HERC6-202ENST00000273960 FXR1P51114 621 aaKnown RBP eCLIP14.52□□□□□ -0.08
HERC6-202ENST00000273960 IRAK1P51617 712 aa14.52□□□□□ -0.08
HERC6-202ENST00000273960 SLC7A5Q01650 507 aa14.52□□□□□ -0.08
HERC6-202ENST00000273960 USP49Q70CQ1 688 aa14.52□□□□□ -0.08
HERC6-202ENST00000273960 SND1Q7KZF4 910 aaKnown RBP eCLIP14.52□□□□□ -0.08
HERC6-202ENST00000273960 POLR3EQ9NVU0 708 aa14.52□□□□□ -0.08
HERC6-202ENST00000273960 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
HERC6-202ENST00000273960 POTEB2H3BUK9 544 aa14.52□□□□□ -0.09
HERC6-202ENST00000273960 HSPD1P10809 573 aaKnown RBP14.52□□□□□ -0.09
HERC6-202ENST00000273960 ANKRD13DQ6ZTN6 518 aa14.52□□□□□ -0.09
HERC6-202ENST00000273960 OTUD6BQ8N6M0 293 aa14.52□□□□□ -0.09
HERC6-202ENST00000273960 SEC31BQ9NQW1 1179 aa14.52□□□□□ -0.09
HERC6-202ENST00000273960 NEBLO76041 1014 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 TRDNQ13061 729 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 E2F5Q15329 346 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 TNNI3KQ59H18 835 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 RALYLQ86SE5 291 aaKnown RBP14.51□□□□□ -0.09
HERC6-202ENST00000273960 FPGT-TNNI3KV9GXZ4 949 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 SKAP2O75563 359 aaPredicted RBP14.51□□□□□ -0.09
HERC6-202ENST00000273960 NFXL1Q6ZNB6 911 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 RPAINQ86UA6 219 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 RRP36Q96EU6 259 aaKnown RBP14.51□□□□□ -0.09
HERC6-202ENST00000273960 HPCAL4Q9UM19 191 aa14.51□□□□□ -0.09
HERC6-202ENST00000273960 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms