RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ZBTB43O43298 467 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 RCAN1P53805 252 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 WTAPQ15007 396 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 AMOTL1Q8IY63 956 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 ZDHHC15Q96MV8 337 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 UBAC1Q9BSL1 405 aa19.18■□□□□ 0.66
TPM1-201ENST00000267996 ERICH2A1L162 156 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 PRDM1O75626 825 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 PTGER2P43116 358 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 DALRD3Q5D0E6 543 aaKnown RBP19.17■□□□□ 0.66
TPM1-201ENST00000267996 APOBEC3HQ6NTF7 200 aaKnown RBP19.17■□□□□ 0.66
TPM1-201ENST00000267996 NFXL1Q6ZNB6 911 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 ZSCAN10Q96SZ4 725 aaPredicted RBP19.17■□□□□ 0.66
TPM1-201ENST00000267996 ZKSCAN3Q9BRR0 538 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 TNKSO95271 1327 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 CCDC69A6NI79 296 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 RANBP6O60518 1105 aaKnown RBP19.17■□□□□ 0.66
TPM1-201ENST00000267996 CRKP46108 304 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 METAP2P50579 478 aaKnown RBP eCLIP19.17■□□□□ 0.66
TPM1-201ENST00000267996 SCNN1DP51172 638 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 DDX11Q96FC9 970 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 FAM217BQ9NTX9 383 aaPredicted RBP19.17■□□□□ 0.66
TPM1-201ENST00000267996 SLC12A7Q9Y666 1083 aa19.17■□□□□ 0.66
TPM1-201ENST00000267996 WDHD1O75717 1129 aaPredicted RBP19.16■□□□□ 0.66
TPM1-201ENST00000267996 FDPSP14324 419 aaKnown RBP19.16■□□□□ 0.66
TPM1-201ENST00000267996 PLCD1P51178 756 aa19.16■□□□□ 0.66
TPM1-201ENST00000267996 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
TPM1-201ENST00000267996 IQCA1Q86XH1 822 aa19.16■□□□□ 0.66
TPM1-201ENST00000267996 ENAHQ8N8S7 591 aaPredicted RBP19.16■□□□□ 0.66
TPM1-201ENST00000267996 FAM184AQ8NB25 1140 aa19.16■□□□□ 0.66
TPM1-201ENST00000267996 ADAMTSL1Q8N6G6 1762 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 MYH1P12882 1939 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 VPS37CA5D8V6 355 aaPredicted RBP19.15■□□□□ 0.66
TPM1-201ENST00000267996 POLR3DP05423 398 aaPredicted RBP19.15■□□□□ 0.66
TPM1-201ENST00000267996 CDC42EP5Q6NZY7 148 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 CDC37L1Q7L3B6 337 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 RAB11FIP4Q86YS3 637 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 KIAA0825Q8IV33 1275 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 CHAMP1Q96JM3 812 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 ZNF277Q9NRM2 450 aaPredicted RBP19.15■□□□□ 0.66
TPM1-201ENST00000267996 LMBRD1Q9NUN5 540 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 USP40Q9NVE5 1235 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 SAP30BPQ9UHR5 308 aaKnown RBP19.15■□□□□ 0.66
TPM1-201ENST00000267996 SERPINA10Q9UK55 444 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 ATP6V1DQ9Y5K8 247 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 COL4A5P29400 1685 aa19.15■□□□□ 0.66
TPM1-201ENST00000267996 GOLGA8AA7E2F4 631 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 TRAK2O60296 914 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 CDC27P30260 824 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 NTRK3Q16288 839 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 SYNE3Q6ZMZ3 975 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 C16orf86Q6ZW13 317 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 MICU3Q86XE3 530 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 DYNLL2Q96FJ2 89 aa19.14■□□□□ 0.66
TPM1-201ENST00000267996 PSDA5PKW4 1024 aaPredicted RBP19.14■□□□□ 0.65
TPM1-201ENST00000267996 CPLX1O14810 134 aa19.14■□□□□ 0.65
TPM1-201ENST00000267996 ADD1P35611 737 aaKnown RBP19.14■□□□□ 0.65
TPM1-201ENST00000267996 ZNF654Q8IZM8 581 aa19.14■□□□□ 0.65
TPM1-201ENST00000267996 LARGE2Q8N3Y3 721 aa19.14■□□□□ 0.65
TPM1-201ENST00000267996 RGS22Q8NE09 1264 aa19.14■□□□□ 0.65
TPM1-201ENST00000267996 FER1L6Q2WGJ9 1857 aa19.14■□□□□ 0.65
TPM1-201ENST00000267996 CDKL5O76039 1030 aa19.13■□□□□ 0.65
TPM1-201ENST00000267996 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
TPM1-201ENST00000267996 SKOR2Q2VWA4 1001 aaPredicted RBP19.13■□□□□ 0.65
TPM1-201ENST00000267996 CPLX2Q6PUV4 134 aaKnown RBP19.13■□□□□ 0.65
TPM1-201ENST00000267996 ANKS1AQ92625 1134 aa19.13■□□□□ 0.65
TPM1-201ENST00000267996 MYL10Q9BUA6 226 aa19.13■□□□□ 0.65
TPM1-201ENST00000267996 ZNF287Q9HBT7 754 aa19.13■□□□□ 0.65
TPM1-201ENST00000267996 DDX4Q9NQI0 724 aaKnown RBP19.13■□□□□ 0.65
TPM1-201ENST00000267996 ECM29Q5VYK3 1845 aa19.13■□□□□ 0.65
TPM1-201ENST00000267996 MYO3BQ8WXR4 1341 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 RXRAP19793 462 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 IARSP41252 1262 aaKnown RBP19.12■□□□□ 0.65
TPM1-201ENST00000267996 SLC4A8Q2Y0W8 1093 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 FAM47AQ5JRC9 791 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 RSBN1LQ6PCB5 846 aaPredicted RBP19.12■□□□□ 0.65
TPM1-201ENST00000267996 GMLQ99445 158 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 TCP11L1Q9NUJ3 509 aa19.12■□□□□ 0.65
TPM1-201ENST00000267996 ORC3Q9UBD5 711 aaPredicted RBP19.12■□□□□ 0.65
TPM1-201ENST00000267996 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
TPM1-201ENST00000267996 RASA1P20936 1047 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 CDK8P49336 464 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 PPP2R5BQ15173 497 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 IFIT1BQ5T764 474 aaKnown RBP19.11■□□□□ 0.65
TPM1-201ENST00000267996 TMEM87AQ8NBN3 555 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 MKNK2Q9HBH9 465 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 TSPY2A6NKD2 308 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 IFNAR1P17181 557 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 TFAP4Q01664 338 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 GABPAQ06546 454 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 RTN1Q16799 776 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 CCDC178Q5BJE1 867 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 RCSD1Q6JBY9 416 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 FANCBQ8NB91 859 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 SLC44A5Q8NCS7 719 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 OSBPL5Q9H0X9 879 aaPredicted RBP19.11■□□□□ 0.65
TPM1-201ENST00000267996 ZNRF3Q9ULT6 936 aa19.11■□□□□ 0.65
TPM1-201ENST00000267996 TCHHQ07283 1943 aa19.1■□□□□ 0.65
TPM1-201ENST00000267996 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms