RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 PUM3Q15397 648 aaKnown RBP13.02□□□□□ -0.32
VPS33A-201ENST00000267199 DPCR1Q3MIW9 517 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 FAM114A1Q8IWE2 563 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 PLEKHA4Q9H4M7 779 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 KCNJ14Q9UNX9 436 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 CTNND2Q9UQB3 1225 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 JAG2Q9Y219 1238 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 IQSEC2Q5JU85 1478 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 SH3TC1Q8TE82 1336 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 ADCY9O60503 1353 aa13.02□□□□□ -0.32
VPS33A-201ENST00000267199 C6orf229H3BNL8 230 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 CUTAO60888 179 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 CTDSPL2Q05D32 466 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 TCIRG1Q13488 830 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 CCDC91Q7Z6B0 441 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 RTL9Q8NET4 1388 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 TLDC2A0PJX2 215 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 EFCAB8A8MWE9 144 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 TSPY3P0CV98 308 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 TSPY8P0CW00 308 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 PDIA3P30101 505 aaKnown RBP13.02□□□□□ -0.33
VPS33A-201ENST00000267199 SPECC1LQ69YQ0 1117 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 CRACR2BQ8N4Y2 399 aaPredicted RBP13.02□□□□□ -0.33
VPS33A-201ENST00000267199 IQUBQ8NA54 791 aa13.02□□□□□ -0.33
VPS33A-201ENST00000267199 PUS3Q9BZE2 481 aaKnown RBP13.02□□□□□ -0.33
VPS33A-201ENST00000267199 DEXIO95424 95 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 TUBB4BP68371 445 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 NLRP3Q96P20 1036 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 INCENPQ9NQS7 918 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 SPTLC3Q9NUV7 552 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 EZRP15311 586 aaKnown RBP13.01□□□□□ -0.33
VPS33A-201ENST00000267199 GYS2P54840 703 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 CTNNBL1Q8WYA6 563 aaPredicted RBP13.01□□□□□ -0.33
VPS33A-201ENST00000267199 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 MCM9Q9NXL9 1143 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 PDE8AO60658 829 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 TAB2Q9NYJ8 693 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 V9GY48 417 aaPredicted RBP13.01□□□□□ -0.33
VPS33A-201ENST00000267199 IQGAP1P46940 1657 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 CALM1P0DP23 149 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 CALM2P0DP24 149 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 CALM3P0DP25 149 aa13.01□□□□□ -0.33
VPS33A-201ENST00000267199 DDX41Q9UJV9 622 aaKnown RBP13.01□□□□□ -0.33
VPS33A-201ENST00000267199 TTF2Q9UNY4 1162 aaKnown RBP13.01□□□□□ -0.33
VPS33A-201ENST00000267199 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
VPS33A-201ENST00000267199 ANKRD65E5RJM6 399 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 CYP2E1P05181 493 aaPredicted RBP13□□□□□ -0.33
VPS33A-201ENST00000267199 MSL1Q68DK7 614 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 SND1Q7KZF4 910 aaKnown RBP eCLIP13□□□□□ -0.33
VPS33A-201ENST00000267199 NSUN7Q8NE18 718 aaKnown RBP13□□□□□ -0.33
VPS33A-201ENST00000267199 RPGRQ92834 1020 aaKnown RBP13□□□□□ -0.33
VPS33A-201ENST00000267199 ERCC3P19447 782 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 CALML3P27482 149 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 GNAQP50148 359 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 PTPN12Q05209 780 aaKnown RBP13□□□□□ -0.33
VPS33A-201ENST00000267199 DDB1Q16531 1140 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 hCG_1642624A0A1W2PR95 340 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 GOLGA6BA6NDN3 693 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 LIG3P49916 1009 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 FBXO18Q8NFZ0 1043 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 LPIN2Q92539 896 aa13□□□□□ -0.33
VPS33A-201ENST00000267199 SYNRGQ9UMZ2 1314 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 GCOM1H8Y6P7 765 aaPredicted RBP12.99□□□□□ -0.33
VPS33A-201ENST00000267199 MYZAPP0CAP1 466 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
VPS33A-201ENST00000267199 MLKLQ8NB16 471 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 BTG4Q9NY30 223 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 ADORA1P30542 326 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 POSTNQ15063 836 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 PSDA5PKW4 1024 aaPredicted RBP12.99□□□□□ -0.33
VPS33A-201ENST00000267199 NAPAP54920 295 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 BRD3Q15059 726 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 ZMYM1Q5SVZ6 1142 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 SELENOSQ9BQE4 189 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 CLIC4Q9Y696 253 aa12.99□□□□□ -0.33
VPS33A-201ENST00000267199 PNMA6AP0CW24 399 aaPredicted RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 TBC1D8BQ0IIM8 1120 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 CLIC6Q96NY7 704 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 SETDB2Q96T68 719 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 USP27XA6NNY8 438 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 CCDC144BQ3MJ40 725 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 EPHA10Q5JZY3 1008 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 TRMT1LQ7Z2T5 733 aaKnown RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 NGLY1Q96IV0 654 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 SERTAD1Q9UHV2 236 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 TSPOAP1O95153 1857 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 LONRF2Q1L5Z9 754 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 SPATA5Q8NB90 893 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 TTC14Q96N46 770 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 RRP15Q9Y3B9 282 aaKnown RBP12.98□□□□□ -0.33
VPS33A-201ENST00000267199 LMTK2Q8IWU2 1503 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 ARHGEF40Q8TER5 1519 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 MAST3O60307 1309 aa12.98□□□□□ -0.33
VPS33A-201ENST00000267199 DTHD1Q6ZMT9 781 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms