RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 TRPC3Q13507 836 aa21.58■■□□□ 1.05
NECTIN1-201ENST00000264025 UBL4BQ8N7F7 174 aa21.58■■□□□ 1.05
NECTIN1-201ENST00000264025 WDR66Q8TBY9 1149 aa21.58■■□□□ 1.05
NECTIN1-201ENST00000264025 OGFRQ9NZT2 677 aa21.58■■□□□ 1.05
NECTIN1-201ENST00000264025 PPP2R5BQ15173 497 aa21.58■■□□□ 1.04
NECTIN1-201ENST00000264025 ZBTB9Q96C00 473 aa21.58■■□□□ 1.04
NECTIN1-201ENST00000264025 BTG4Q9NY30 223 aa21.58■■□□□ 1.04
NECTIN1-201ENST00000264025 KRT25Q7Z3Z0 450 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 MAPK8IP1Q9UQF2 711 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 NONOQ15233 471 aaKnown RBP eCLIP21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 OTUD7AQ8TE49 926 aaPredicted RBP21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 UTP14CQ5TAP6 766 aaKnown RBP21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 ZNF365Q70YC5 407 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 NOX5Q96PH1 765 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 MAPKBP1O60336 1514 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 SGSM2O43147 1006 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 RASA3Q14644 834 aa21.57■■□□□ 1.04
NECTIN1-201ENST00000264025 ADCY7P51828 1080 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 ECM2O94769 699 aaPredicted RBP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 NCAPH2Q6IBW4 605 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 KBTBD3Q8NAB2 608 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 UTP11Q9Y3A2 253 aaKnown RBP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 PRDM1O75626 825 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 LACTBP83111 547 aaPredicted RBP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 KLHDC4Q8TBB5 520 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 SBNO1A3KN83 1393 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 LRWD1Q9UFC0 647 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 CCNL1Q9UK58 526 aaPredicted RBP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 VIMP08670 466 aaKnown RBP21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 SLC9C1Q4G0N8 1177 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 SNX29Q8TEQ0 813 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 LPIN2Q92539 896 aa21.56■■□□□ 1.04
NECTIN1-201ENST00000264025 NOL3O60936 208 aaKnown RBP21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 PPP1R21Q6ZMI0 780 aa21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 SECISBP2LQ93073 1101 aaKnown RBP21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 RBSNQ9H1K0 784 aa21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 GMNNO75496 209 aa21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 NLRP12P59046 1061 aa21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 ZNF594Q96JF6 807 aaPredicted RBP21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.55■■□□□ 1.04
NECTIN1-201ENST00000264025 PPFIBP2Q8ND30 876 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 LZTS2Q9BRK4 669 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 IBTKQ9P2D0 1353 aaPredicted RBP21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 KCNA6P17658 529 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 TTC31Q49AM3 519 aaPredicted RBP21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 RNF34Q969K3 372 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 AATFQ9NY61 560 aaKnown RBP eCLIP21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 AFAP1L1Q8TED9 768 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 GJA3Q9Y6H8 435 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 BRDTQ58F21 947 aaPredicted RBP21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 GTF3C6Q969F1 213 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 HPDP32754 393 aaPredicted RBP21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 CCT6BQ92526 530 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 IMPACTQ9P2X3 320 aa21.54■■□□□ 1.04
NECTIN1-201ENST00000264025 CIB2O75838 187 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 ZNF202O95125 648 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 TMTC1Q8IUR5 882 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 FYB2Q5VWT5 728 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 IFT20Q8IY31 132 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 SLC1A4P43007 532 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 HERC4Q5GLZ8 1057 aaPredicted RBP21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 STMN2Q93045 179 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 IL13P35225 146 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 ZNF75DP51815 510 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 PLCD3Q8N3E9 789 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 MKRN1Q9UHC7 482 aaKnown RBP21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 DNM3Q9UQ16 869 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 SH3BP5O60239 455 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 OTUD7BQ6GQQ9 843 aa21.53■■□□□ 1.04
NECTIN1-201ENST00000264025 SWAP70Q9UH65 585 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 PEG3Q9GZU2 1588 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 NCKAP5LQ9HCH0 1330 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 NOP56O00567 594 aaKnown RBP21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 STK10O94804 968 aaKnown RBP21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 GEN1Q17RS7 908 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 CBX8Q9HC52 389 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 CRCPO75575 148 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 MYCLP12524 364 aaPredicted RBP21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 CDAN1Q8IWY9 1227 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 SUCLG2Q96I99 432 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 TRAPPC8Q9Y2L5 1435 aa21.52■■□□□ 1.04
NECTIN1-201ENST00000264025 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 U2AF2P26368 475 aaKnown RBP eCLIP21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 ARID4AP29374 1257 aaPredicted RBP21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 RNASE9P60153 205 aaKnown RBP21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 CTDSPL2Q05D32 466 aa21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 KRT40Q6A162 431 aa21.52■■□□□ 1.03
NECTIN1-201ENST00000264025 FAM173BQ6P4H8 233 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 FAM184BQ9ULE4 1060 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 NOD1Q9Y239 953 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 B4GALNT4Q76KP1 1039 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 SLC52A2Q9HAB3 445 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 CTTNBP2NLQ9P2B4 639 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 DAPK3O43293 454 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 POSTNQ15063 836 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 MROH5Q6ZUA9 1318 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 CHL1O00533 1208 aa21.51■■□□□ 1.03
NECTIN1-201ENST00000264025 SPATA5Q8NB90 893 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms