RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 MLKLQ8NB16 471 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 IMPG2Q9BZV3 1241 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 LSG1Q9H089 658 aaKnown RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 TMEM63CQ9P1W3 806 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 MAPK8IP1Q9UQF2 711 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 CLEC11AQ9Y240 323 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 ARID4AP29374 1257 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 SP4Q02446 784 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 MAP2K1Q02750 393 aaPredicted RBP15.75■□□□□ 0.11
CDH3-201ENST00000264012 SYT10Q6XYQ8 523 aa15.75■□□□□ 0.11
CDH3-201ENST00000264012 IQGAP3Q86VI3 1631 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 TSPOAP1O95153 1857 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 PFKFB2O60825 505 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 CHRNDQ07001 517 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 CEP112Q8N8E3 955 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 SELENOOQ9BVL4 669 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 RRAGDQ9NQL2 400 aaPredicted RBP15.74■□□□□ 0.11
CDH3-201ENST00000264012 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 BACH1O14867 736 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 IL6STP40189 918 aaPredicted RBP15.74■□□□□ 0.11
CDH3-201ENST00000264012 CRKLP46109 303 aaKnown RBP15.74■□□□□ 0.11
CDH3-201ENST00000264012 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 GPR108Q9NPR9 543 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 GJA3Q9Y6H8 435 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 CDC42BPAQ5VT25 1732 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 PHKA1P46020 1223 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 ADCY7P51828 1080 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 GTF2IP78347 998 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 TCP10Q12799 353 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 SYNCQ9H7C4 482 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
CDH3-201ENST00000264012 CIAO1O76071 339 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 ADORA1P30542 326 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 ZNF569Q5MCW4 686 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 RASEFQ8IZ41 740 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 IGSF22Q8N9C0 903 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 SDR42E1Q8WUS8 393 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 VPS16Q9H269 839 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 MTMR6Q9Y217 621 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 FANCCQ00597 558 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 HAUS3Q68CZ6 603 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 CNNM4Q6P4Q7 775 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 ALDH1B1P30837 517 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 ADD1P35611 737 aaKnown RBP15.73■□□□□ 0.11
CDH3-201ENST00000264012 TERF1P54274 439 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 NOC4LQ9BVI4 516 aaKnown RBP15.73■□□□□ 0.11
CDH3-201ENST00000264012 PKP1Q13835 747 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 ZYXQ15942 572 aaKnown RBP15.73■□□□□ 0.11
CDH3-201ENST00000264012 SIRT2Q8IXJ6 389 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
CDH3-201ENST00000264012 APBA3O96018 575 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 PRPHP41219 470 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 DCAF17Q5H9S7 520 aaPredicted RBP15.72■□□□□ 0.11
CDH3-201ENST00000264012 LMBR1Q8WVP7 490 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 NLRP12P59046 1061 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 UBE3CQ15386 1083 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 CCDC91Q7Z6B0 441 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 CHMP2AO43633 222 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 ZNF75DP51815 510 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 USPL1Q5W0Q7 1092 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 RGS12O14924 1447 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 POSTNQ15063 836 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 CSGALNACT2Q8N6G5 542 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 GOLGA1Q92805 767 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
CDH3-201ENST00000264012 ACTN2P35609 894 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 ADCK5Q3MIX3 580 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 TTF2Q9UNY4 1162 aaKnown RBP15.71■□□□□ 0.11
CDH3-201ENST00000264012 NFE2L3Q9Y4A8 694 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 MCM6Q14566 821 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 SNX29Q8TEQ0 813 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 USP28Q96RU2 1077 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 ZSCAN10Q96SZ4 725 aaPredicted RBP15.71■□□□□ 0.11
CDH3-201ENST00000264012 ARAP3Q8WWN8 1544 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 PAK1Q13153 545 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 SMC1AQ14683 1233 aaKnown RBP15.71■□□□□ 0.11
CDH3-201ENST00000264012 FANCBQ8NB91 859 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 SUPT20HQ8NEM7 779 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 MAP3K4Q9Y6R4 1608 aa15.71■□□□□ 0.11
CDH3-201ENST00000264012 ADCY9O60503 1353 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 TNKSO95271 1327 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 ZMYM1Q5SVZ6 1142 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 ADALQ6DHV7 355 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 KRT222Q8N1A0 295 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 CMTR1Q8N1G2 835 aaKnown RBP15.71■□□□□ 0.1
CDH3-201ENST00000264012 RGS22Q8NE09 1264 aa15.71■□□□□ 0.1
CDH3-201ENST00000264012 HSF2BPO75031 334 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 GTF2F1P35269 517 aaKnown RBP eCLIP15.7■□□□□ 0.1
CDH3-201ENST00000264012 RAPGEF1Q13905 1077 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 REXO1Q8N1G1 1221 aaKnown RBP15.7■□□□□ 0.1
CDH3-201ENST00000264012 CAPZA3Q96KX2 299 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 USP40Q9NVE5 1235 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 CLTCL1P53675 1640 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 UBE4AQ14139 1066 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 PICK1Q9NRD5 415 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 A2ML1A8K2U0 1454 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 LMAN1P49257 510 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 CCDC122Q5T0U0 273 aa15.7■□□□□ 0.1
CDH3-201ENST00000264012 NOSTRINQ8IVI9 506 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms