RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NOL8Q76FK4 1167 aaKnown RBP11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 SH3BP5LQ7L8J4 393 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 SLC44A5Q8NCS7 719 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 NEK1Q96PY6 1258 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 LRRC2Q9BYS8 371 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 OSBPL5Q9H0X9 879 aaPredicted RBP11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 ZSWIM6Q9HCJ5 1215 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 POLR2AP24928 1970 aaKnown RBP11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 DDTLA6NHG4 134 aaPredicted RBP11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 B4E1Z4 1266 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 ANP32AP39687 249 aaKnown RBP11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 RRP12Q5JTH9 1297 aaKnown RBP11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 CDAN1Q8IWY9 1227 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 IDI2Q9BXS1 227 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 TOMM22Q9NS69 142 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 ANAPC4Q9UJX5 808 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 CNTNAP1P78357 1384 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 PSMA5P28066 241 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 SLC4A3P48751 1232 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 KRT32Q14532 448 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 BLOC1S2Q6QNY1 142 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 MFSD6Q6ZSS7 791 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 RUFY3Q7L099 469 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 TM6SF1Q9BZW5 370 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 TMOD2Q9NZR1 351 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 HACL1Q9UJ83 578 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 CYP46A1Q9Y6A2 500 aa11.54□□□□□ -0.56
SNRNP40-201ENST00000263694 GLTPD2A6NH11 291 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 MYO1BO43795 1136 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 KDM4AO75164 1064 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 RPS6KB1P23443 525 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 LMOD1P29536 600 aaPredicted RBP11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 ANTXR2P58335 489 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 ZSCAN29Q8IWY8 852 aaPredicted RBP11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 NCOA7Q8NI08 942 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 TTC14Q96N46 770 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 TMEM39BQ9GZU3 492 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 PDRG1Q9NUG6 133 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 SIPA1L1O43166 1804 aa11.53□□□□□ -0.56
SNRNP40-201ENST00000263694 POTECB2RU33 542 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 POTEIP0CG38 1075 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 EXOSC10Q01780 885 aaKnown RBP11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 FAM47AQ5JRC9 791 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 ANGEL2Q5VTE6 544 aaKnown RBP11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 RALYLQ86SE5 291 aaKnown RBP11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 AMOTL1Q8IY63 956 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 MB21D2Q8IYB1 491 aaPredicted RBP11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 ZKSCAN3Q9BRR0 538 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.52□□□□□ -0.57
SNRNP40-201ENST00000263694 PRC1O43663 620 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 RANBP6O60518 1105 aaKnown RBP11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 ENTPD3O75355 529 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 CDK8P49336 464 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 MMP14P50281 582 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 AK2P54819 239 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 TRDNQ13061 729 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 PRAMEF18Q5VWM3 479 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 Q6ZUG5 572 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 DHX32Q7L7V1 743 aaKnown RBP11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 FAM151AQ8WW52 585 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 ZSWIM5Q9P217 1185 aa11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 FARP1Q9Y4F1 1045 aaPredicted RBP11.51□□□□□ -0.57
SNRNP40-201ENST00000263694 FGRP09769 529 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 TOB2Q14106 344 aaPredicted RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 RASA3Q14644 834 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 C16orf86Q6ZW13 317 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 TTC6Q86TZ1 520 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 RNF41Q9H4P4 317 aaPredicted RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 DNAJC18Q9H819 358 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 SENP2Q9HC62 589 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 ADARB2Q9NS39 739 aaKnown RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 MYH8P13535 1937 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 ROBO3Q96MS0 1386 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 ZC3H4Q9UPT8 1303 aaKnown RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 ORC4O43929 436 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 ST18O60284 1047 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 NMT2O60551 498 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 DTNBO60941 627 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 SLC3A2P08195 630 aaKnown RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 RASA1P20936 1047 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 MCM5P33992 734 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 EPHX2P34913 555 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 GABPAQ06546 454 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 PDE4BQ07343 736 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 SPRYD3Q8NCJ5 442 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 CSRNP1Q96S65 589 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 KRT23Q9C075 422 aa11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 DHX36Q9H2U1 1008 aaKnown RBP11.5□□□□□ -0.57
SNRNP40-201ENST00000263694 CNNM2Q9H8M5 875 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms