RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 ZNF365Q70YC5 407 aa16.59■□□□□ 0.25
CCDC6-201ENST00000263102 SND1Q7KZF4 910 aaKnown RBP eCLIP16.59■□□□□ 0.25
CCDC6-201ENST00000263102 ZBED2Q9BTP6 218 aa16.59■□□□□ 0.25
CCDC6-201ENST00000263102 RSPH14Q9UHP6 348 aa16.59■□□□□ 0.25
CCDC6-201ENST00000263102 MAPK8IP1Q9UQF2 711 aa16.59■□□□□ 0.25
CCDC6-201ENST00000263102 ABCC5O15440 1437 aa16.59■□□□□ 0.25
CCDC6-201ENST00000263102 SLC4A1P02730 911 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 ASIC2Q16515 512 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 CPLX4Q7Z7G2 160 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 RDH13Q8NBN7 331 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 HECW1Q76N89 1606 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 ANKRD35Q8N283 1001 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 SUGCTQ9HAC7 445 aa16.58■□□□□ 0.25
CCDC6-201ENST00000263102 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.58■□□□□ 0.25
CCDC6-201ENST00000263102 B4E1Z4 1266 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 ADCY7P51828 1080 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 USP40Q9NVE5 1235 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 PRIM1P49642 420 aaKnown RBP16.58■□□□□ 0.24
CCDC6-201ENST00000263102 TMTC4Q5T4D3 741 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 TPH2Q8IWU9 490 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 POMGNT1Q8WZA1 660 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 NKIRAS1Q9NYS0 192 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 LMCD1Q9NZU5 365 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 RHOXF2BP0C7M4 288 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 GNL1P36915 607 aaPredicted RBP16.58■□□□□ 0.24
CCDC6-201ENST00000263102 MUM1L1Q5H9M0 696 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 CCDC121Q6ZUS5 278 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 DYMQ7RTS9 669 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 RHOXF2Q9BQY4 288 aa16.58■□□□□ 0.24
CCDC6-201ENST00000263102 RNASELQ05823 741 aaKnown RBP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 KRT81Q14533 505 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 GKAP1Q5VSY0 366 aaPredicted RBP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 BICC1Q9H694 974 aaKnown RBP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 GTF2IP78347 998 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 TRIM31Q9BZY9 425 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 TRIM50Q86XT4 487 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 NELFCDQ8IXH7 590 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 NCAPGQ9BPX3 1015 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 PABPC4Q13310 644 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 RPS6KC1Q96S38 1066 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 MRPL44Q9H9J2 332 aaKnown RBP16.57■□□□□ 0.24
CCDC6-201ENST00000263102 ZRANB1Q9UGI0 708 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 EXOC3O60645 756 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 MNAT1P51948 309 aa16.57■□□□□ 0.24
CCDC6-201ENST00000263102 DENND4BO75064 1496 aaPredicted RBP16.56■□□□□ 0.24
CCDC6-201ENST00000263102 SCNN1DP51172 638 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 FEZ2Q9UHY8 353 aaPredicted RBP16.56■□□□□ 0.24
CCDC6-201ENST00000263102 STMN2Q93045 179 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 SAMD15Q9P1V8 674 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 ALDH1L1O75891 902 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 SAT1P21673 171 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 TNNC1P63316 161 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 KIAA1841Q6NSI8 718 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 NUCKS1Q9H1E3 243 aaKnown RBP16.56■□□□□ 0.24
CCDC6-201ENST00000263102 C19orf44Q9H6X5 657 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 CTDSPL2Q05D32 466 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 MIER3Q7Z3K6 550 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 DCAF5Q96JK2 942 aa16.56■□□□□ 0.24
CCDC6-201ENST00000263102 NKTRP30414 1462 aaKnown RBP16.56■□□□□ 0.24
CCDC6-201ENST00000263102 SEPT6Q14141 434 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 PPP2R5AQ15172 486 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 CTTNBP2NLQ9P2B4 639 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 VIMP08670 466 aaKnown RBP16.55■□□□□ 0.24
CCDC6-201ENST00000263102 FYB2Q5VWT5 728 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 TMX3Q96JJ7 454 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 POLIQ9UNA4 740 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 TTF2Q9UNY4 1162 aaKnown RBP16.55■□□□□ 0.24
CCDC6-201ENST00000263102 SKILP12757 684 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 TNFAIP1Q13829 316 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 IQUBQ8NA54 791 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 SPDYE1Q8NFV5 336 aaPredicted RBP16.55■□□□□ 0.24
CCDC6-201ENST00000263102 RNF217Q8TC41 542 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 GNPTABQ3T906 1256 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 DCLK2Q8N568 766 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 SNX29Q8TEQ0 813 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 ZNF594Q96JF6 807 aaPredicted RBP16.55■□□□□ 0.24
CCDC6-201ENST00000263102 NUF2Q9BZD4 464 aa16.55■□□□□ 0.24
CCDC6-201ENST00000263102 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 PUM3Q15397 648 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 MTHFSDQ2M296 383 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 OTUD6AQ7L8S5 288 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 CCDC170Q8IYT3 715 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 TRIM56Q9BRZ2 755 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 MOSPD1Q9UJG1 213 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 DNM3Q9UQ16 869 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 ARHGAP44Q17R89 818 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 DDX17Q92841 729 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 RAB3IPQ96QF0 476 aaPredicted RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 AP5M1Q9H0R1 490 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 SDSP20132 328 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 RBBP5Q15291 538 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 RPS6KA2Q15349 733 aa16.54■□□□□ 0.24
CCDC6-201ENST00000263102 PSPC1Q8WXF1 523 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 LUC7L2Q9Y383 392 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 V9GY48 417 aaPredicted RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 DNM1Q05193 864 aaKnown RBP16.54■□□□□ 0.24
CCDC6-201ENST00000263102 CCDC171Q6TFL3 1326 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms