RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 PARK7Q99497 189 aaKnown RBP23.28■■□□□ 1.32
TM6SF1-201ENST00000258909 RBBP6Q7Z6E9 1792 aaKnown RBP23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 CDK5RAP2Q96SN8 1893 aa23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 BAG3O95817 575 aa23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 RRP1BQ14684 758 aaKnown RBP23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 MAPKAPK5Q8IW41 473 aa23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 TGFBRAP1Q8WUH2 860 aa23.27■■□□□ 1.32
TM6SF1-201ENST00000258909 ATAD5Q96QE3 1844 aa23.26■■□□□ 1.31
TM6SF1-201ENST00000258909 FMNL1O95466 1100 aaPredicted RBP23.26■■□□□ 1.31
TM6SF1-201ENST00000258909 NBPF11Q86T75 865 aa23.26■■□□□ 1.31
TM6SF1-201ENST00000258909 COL2A1P02458 1487 aaPredicted RBP23.25■■□□□ 1.31
TM6SF1-201ENST00000258909 DYNLL1P63167 89 aaKnown RBP23.25■■□□□ 1.31
TM6SF1-201ENST00000258909 AACSQ86V21 672 aa23.25■■□□□ 1.31
TM6SF1-201ENST00000258909 TMEM106CQ9BVX2 250 aa23.25■■□□□ 1.31
TM6SF1-201ENST00000258909 SIPA1L1O43166 1804 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 GNRH1P01148 92 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 BCRP11274 1271 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 OSBPP22059 807 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 PPP4CP60510 307 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 IL1RAPL2Q9NP60 686 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 IDH1O75874 414 aaKnown RBP23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 PLCG2P16885 1265 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 CYP7A1P22680 504 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 CAP2P40123 477 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 SPP2Q13103 211 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 BCL11AQ9H165 835 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 SRRDQ9UH36 339 aa23.24■■□□□ 1.31
TM6SF1-201ENST00000258909 APBB1O00213 710 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 SLC4A8Q2Y0W8 1093 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 TREML2Q5T2D2 321 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 PRPF38BQ5VTL8 546 aaKnown RBP23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 ERC1Q8IUD2 1116 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 ANTXR1Q9H6X2 564 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 PI4KBQ9UBF8 816 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 SAP30BPQ9UHR5 308 aaKnown RBP23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 PALD1Q9ULE6 856 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 FOCADQ5VW36 1801 aa23.23■■□□□ 1.31
TM6SF1-201ENST00000258909 MGAMO43451 1857 aa23.22■■□□□ 1.31
TM6SF1-201ENST00000258909 FLT1P17948 1338 aa23.22■■□□□ 1.31
TM6SF1-201ENST00000258909 MS4A1P11836 297 aa23.22■■□□□ 1.31
TM6SF1-201ENST00000258909 MIGA1Q8NAN2 632 aa23.22■■□□□ 1.31
TM6SF1-201ENST00000258909 HERC5Q9UII4 1024 aaKnown RBP23.22■■□□□ 1.31
TM6SF1-201ENST00000258909 PRMT2P55345 433 aa23.21■■□□□ 1.31
TM6SF1-201ENST00000258909 MAGEB6Q8N7X4 407 aa23.21■■□□□ 1.31
TM6SF1-201ENST00000258909 SMCR8Q8TEV9 937 aaPredicted RBP23.21■■□□□ 1.31
TM6SF1-201ENST00000258909 DHX36Q9H2U1 1008 aaKnown RBP23.21■■□□□ 1.31
TM6SF1-201ENST00000258909 MYPNQ86TC9 1320 aa23.21■■□□□ 1.31
TM6SF1-201ENST00000258909 HOXD10P28358 340 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 ZNF280CQ8ND82 737 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 RHPN1Q8TCX5 695 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 RAET1EQ8TD07 263 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 DNAJC18Q9H819 358 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 AGTPBP1Q9UPW5 1226 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 SLC45A1Q9Y2W3 748 aa23.2■■□□□ 1.3
TM6SF1-201ENST00000258909 HMGCS2P54868 508 aa23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 FCGRTP55899 365 aa23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 JAG1P78504 1218 aa23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 PRKCZQ05513 592 aa23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 SHROOM1Q2M3G4 852 aaPredicted RBP23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 SIRT2Q8IXJ6 389 aa23.19■■□□□ 1.3
TM6SF1-201ENST00000258909 USP17L5A8MUK1 530 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 MTFR1Q15390 333 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 CRACR2BQ8N4Y2 399 aaPredicted RBP23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 ZBTB40Q9NUA8 1239 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 RCAN3Q9UKA8 241 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 DDX19BQ9UMR2 479 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 GABRQQ9UN88 632 aa23.18■■□□□ 1.3
TM6SF1-201ENST00000258909 TRIM34Q9BYJ4 488 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 MYH1P12882 1939 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 LOC285556D6RIA3 1793 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 GDF11O95390 407 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 GRK4P32298 578 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 FOXP4Q8IVH2 680 aaPredicted RBP23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 RPAP2Q8IXW5 612 aaPredicted RBP23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 ANKRD13CQ8N6S4 541 aa23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 PROCA1Q8NCQ7 364 aaPredicted RBP23.17■■□□□ 1.3
TM6SF1-201ENST00000258909 IGSF3O75054 1194 aa23.16■■□□□ 1.3
TM6SF1-201ENST00000258909 MAP3K12Q12852 859 aa23.16■■□□□ 1.3
TM6SF1-201ENST00000258909 USP5P45974 858 aa23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 METTL16Q86W50 562 aaKnown RBP23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 CLASRPQ8N2M8 674 aaKnown RBP23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 KIF1BPQ96EK5 621 aa23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 AS3MTQ9HBK9 375 aa23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 BIN2Q9UBW5 565 aaPredicted RBP23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 DOCK3Q8IZD9 2030 aa23.15■■□□□ 1.3
TM6SF1-201ENST00000258909 HMMRO75330 724 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 SLC34A2O95436 690 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 HLA-DOAP06340 250 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 MTMR2Q13614 643 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 C20orf194Q5TEA3 1177 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 TBC1D2Q9BYX2 928 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 PNMA3Q9UL41 463 aa23.14■■□□□ 1.29
TM6SF1-201ENST00000258909 TNPO2O14787 897 aaKnown RBP23.13■■□□□ 1.29
TM6SF1-201ENST00000258909 ASNSP08243 561 aa23.13■■□□□ 1.29
TM6SF1-201ENST00000258909 IFIT2P09913 472 aaKnown RBP23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 FLT3LGP49771 235 aa23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 SH3D19Q5HYK7 790 aa23.12■■□□□ 1.29
TM6SF1-201ENST00000258909 DNAJC2Q99543 621 aaKnown RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms