RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 H0YIN7 160 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 EPB41L2O43491 1005 aaKnown RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 ABCD1P33897 745 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 CCZ1BP86790 482 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 CCZ1P86791 482 aaPredicted RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 GPR162Q16538 588 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 ALDH1L2Q3SY69 923 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 ISM2Q6H9L7 571 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 CPLX2Q6PUV4 134 aaKnown RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 RBM12BQ8IXT5 1001 aaKnown RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 JPH2Q9BR39 696 aaPredicted RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 MMTAG2Q9BU76 263 aaKnown RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 BCL2L13Q9BXK5 485 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
CCNA1-201ENST00000255465 CHD4Q14839 1912 aa13.52□□□□□ -0.25
CCNA1-201ENST00000255465 TCHHQ07283 1943 aa13.51□□□□□ -0.25
CCNA1-201ENST00000255465 ERC2O15083 957 aa13.51□□□□□ -0.25
CCNA1-201ENST00000255465 YBX3P16989 372 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCNA1-201ENST00000255465 BRAPQ7Z569 592 aa13.51□□□□□ -0.25
CCNA1-201ENST00000255465 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
CCNA1-201ENST00000255465 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
CCNA1-201ENST00000255465 KLRG2A4D1S0 409 aaPredicted RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 ETF1P62495 437 aaKnown RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 TYRO3Q06418 890 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 NEXNQ0ZGT2 675 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 ATF7IPQ6VMQ6 1270 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 RBM43Q6ZSC3 357 aaKnown RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 TRIM73Q86UV7 250 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 IQCA1Q86XH1 822 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 SYNE4Q8N205 404 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 MAB21L3Q8N8X9 362 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 KCNB2Q92953 911 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 LARP6Q9BRS8 491 aaKnown RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 VPS18Q9P253 973 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 MYO6Q9UM54 1294 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 SLX4Q8IY92 1834 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 USP27XA6NNY8 438 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 A6NNZ2 444 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 F6X3S4 739 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 H3BQF6 201 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 ERLIN1O75477 346 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 CDKL5O76039 1030 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 FSBPO95073 299 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 IGKV5-2P06315 115 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 SRGNP10124 158 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 USP5P45974 858 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 PLCB4Q15147 1175 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 TUBB8Q3ZCM7 444 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 GIMAP6Q6P9H5 292 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC150Q8NCX0 1101 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 ZKSCAN4Q969J2 545 aaPredicted RBP13.5□□□□□ -0.25
CCNA1-201ENST00000255465 XAGE2Q96GT9 111 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 CRACR2AQ9BSW2 395 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 SLC24A3Q9HC58 644 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 NRBP1Q9UHY1 535 aa13.5□□□□□ -0.25
CCNA1-201ENST00000255465 MYH3P11055 1940 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 SH3TC1Q8TE82 1336 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 EBAG9O00559 213 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 SMARCA5O60264 1052 aaPredicted RBP13.49□□□□□ -0.25
CCNA1-201ENST00000255465 CCNHP51946 323 aaPredicted RBP13.49□□□□□ -0.25
CCNA1-201ENST00000255465 CCT2P78371 535 aaKnown RBP13.49□□□□□ -0.25
CCNA1-201ENST00000255465 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 HSP90B2PQ58FF3 399 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 FAM89AQ96GI7 184 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 GBP3Q9H0R5 595 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
CCNA1-201ENST00000255465 CBX8Q9HC52 389 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 CWC25Q9NXE8 425 aaPredicted RBP13.49□□□□□ -0.25
CCNA1-201ENST00000255465 BCS1LQ9Y276 419 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 TAF1P21675 1872 aa13.49□□□□□ -0.25
CCNA1-201ENST00000255465 UTRNP46939 3433 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 SEC31AO94979 1220 aaKnown RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 INPP5BP32019 993 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 CWF19L2Q2TBE0 894 aaKnown RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 TBC1D25Q3MII6 688 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 DALRD3Q5D0E6 543 aaKnown RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 CWC27Q6UX04 472 aaKnown RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 RSRC2Q7L4I2 434 aaKnown RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 MPHOSPH8Q99549 860 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 KDM4CQ9H3R0 1056 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 AKAP2Q9Y2D5 859 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 EVCP57679 992 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 CDC37Q16543 378 aaPredicted RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 CRY2Q49AN0 593 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 HSP90AB4PQ58FF6 505 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 STYK1Q6J9G0 422 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 ZBTB38Q8NAP3 1195 aaPredicted RBP13.48□□□□□ -0.25
CCNA1-201ENST00000255465 MASTLQ96GX5 879 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
CCNA1-201ENST00000255465 CCDC69A6NI79 296 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 H7C1W4 665 aa13.47□□□□□ -0.25
CCNA1-201ENST00000255465 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms