RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 B4E1Z4 1266 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 IGHDP01880 384 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 SMTNP53814 917 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 KIF4BQ2VIQ3 1234 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 ZNF277Q9NRM2 450 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-201ENST00000255266 ANO10Q9NW15 660 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 EXOC7Q9UPT5 735 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 GCOM1H8Y6P7 765 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-201ENST00000255266 POLR2MP0CAP2 368 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 TAF12Q16514 161 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 CCDC40Q4G0X9 1142 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 TTLL11Q8NHH1 800 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 GTF3C2Q8WUA4 911 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-201ENST00000255266 COA7Q96BR5 231 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 NAP1L5Q96NT1 182 aaPredicted RBP10.47□□□□□ -0.73
PDE6A-201ENST00000255266 CD2APQ9Y5K6 639 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 CDR1P51861 262 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 KRT26Q7Z3Y9 468 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 RSPH3Q86UC2 560 aa10.47□□□□□ -0.73
PDE6A-201ENST00000255266 PHACTR2O75167 634 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 CRKP46108 304 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 HLFQ16534 295 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 RNF216Q9NWF9 866 aaPredicted RBP10.46□□□□□ -0.73
PDE6A-201ENST00000255266 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 PLSCR1O15162 318 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 DDAH1O94760 285 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 TCHPQ9BT92 498 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 ISCA1Q9BUE6 129 aa10.46□□□□□ -0.73
PDE6A-201ENST00000255266 PNMA6EA0A0J9YXQ4 647 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 MAP3K11Q16584 847 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 GPATCH4Q5T3I0 446 aaKnown RBP10.46□□□□□ -0.74
PDE6A-201ENST00000255266 MLXIPQ9HAP2 919 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 ATP6V0A2Q9Y487 856 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 USP42Q9H9J4 1324 aaKnown RBP10.46□□□□□ -0.74
PDE6A-201ENST00000255266 NR1I2O75469 434 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 GPS2Q13227 327 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 TRIM28Q13263 835 aaKnown RBP10.46□□□□□ -0.74
PDE6A-201ENST00000255266 ASPRV1Q53RT3 343 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 FAM160B1Q5W0V3 765 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 SLFN13Q68D06 897 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 FASTKD5Q7L8L6 764 aaKnown RBP10.46□□□□□ -0.74
PDE6A-201ENST00000255266 FCHSD1Q86WN1 690 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 PHLPP1O60346 1717 aa10.46□□□□□ -0.74
PDE6A-201ENST00000255266 SREBF2Q12772 1141 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 JAKMIP3Q5VZ66 844 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 OTUD6AQ7L8S5 288 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 RAB11FIP4Q86YS3 637 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 EXOC8Q8IYI6 725 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 IFNL3Q8IZI9 196 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 A0A0G2JLW4 131 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 USP17L12C9JPN9 530 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 USP17L21D6R901 530 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 FMNL1O95466 1100 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 GALNT17Q6IS24 598 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 DTHD1Q6ZMT9 781 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 CAGE1Q8TC20 777 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 DDX19AQ9NUU7 478 aaKnown RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 PPP1R2P41236 205 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 TSHZ2Q9NRE2 1034 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 hCG_1984214I3L0E3 225 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 TTLL1O95922 423 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 ASNSP08243 561 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 PHKA1P46020 1223 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 STRN3Q13033 797 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 TBC1D10BQ4KMP7 808 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 ATL3Q6DD88 541 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 FBXO11Q86XK2 927 aa10.45□□□□□ -0.74
PDE6A-201ENST00000255266 CCAR2Q8N163 923 aaKnown RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 ZNF713Q8N859 430 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 LLPHQ9BRT6 129 aaKnown RBP10.45□□□□□ -0.74
PDE6A-201ENST00000255266 PRAMEF22A3QJZ6 481 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 DPEP1P16444 411 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 PRR5LQ6MZQ0 368 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 DEFB132Q7Z7B7 95 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 VPS33BQ9H267 617 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 RLBP1P12271 317 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 ALAS1P13196 640 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 RPS6KB1P23443 525 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 ODR4Q5SWX8 454 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CACNA2D4Q7Z3S7 1137 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 GPSM2P81274 684 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 NONOQ15233 471 aaKnown RBP eCLIP10.44□□□□□ -0.74
PDE6A-201ENST00000255266 USP17L2Q6R6M4 530 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 MSANTD4Q8NCY6 345 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 TBC1D2Q9BYX2 928 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 HOMER2Q9NSB8 354 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 FBXO40Q9UH90 709 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 MROH1Q8NDA8 1641 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 COL5A2P05997 1499 aaPredicted RBP10.44□□□□□ -0.74
PDE6A-201ENST00000255266 FOSP01100 380 aaPredicted RBP10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CAVIN1Q6NZI2 390 aaKnown RBP10.44□□□□□ -0.74
PDE6A-201ENST00000255266 FERMT3Q86UX7 667 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 FERMT1Q9BQL6 677 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 ZKSCAN3Q9BRR0 538 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 PLA2G12BQ9BX93 195 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 CCPG1Q9ULG6 757 aa10.44□□□□□ -0.74
PDE6A-201ENST00000255266 MINPP1Q9UNW1 487 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms