RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 ASCC2Q9H1I8 757 aaPredicted RBP15.05■□□□□ -0
RFPL3-201ENST00000249007 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
RFPL3-201ENST00000249007 HOXD11P31277 338 aaPredicted RBP15.04■□□□□ -0
RFPL3-201ENST00000249007 MAP3K10Q02779 954 aa15.04■□□□□ -0
RFPL3-201ENST00000249007 VGLL2Q8N8G2 317 aa15.04■□□□□ -0
RFPL3-201ENST00000249007 LTBP2Q14767 1821 aa15.04■□□□□ -0
RFPL3-201ENST00000249007 MYH13Q9UKX3 1938 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 MYO9BQ13459 2157 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 ENTPD3O75355 529 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 SLURP2P0DP57 97 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 PRDX5P30044 214 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 ATN1P54259 1190 aaPredicted RBP15.03■□□□□ -0
RFPL3-201ENST00000249007 SPP2Q13103 211 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 LRRC24Q50LG9 513 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 SH3BP5LQ7L8J4 393 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 USP38Q8NB14 1042 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 MORF4L1Q9UBU8 362 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 KIF16BQ96L93 1317 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 LOC285556D6RIA3 1793 aa15.03■□□□□ -0
RFPL3-201ENST00000249007 IFIT1P09914 478 aaKnown RBP15.02■□□□□ -0
RFPL3-201ENST00000249007 HMGCS2P54868 508 aa15.02■□□□□ -0
RFPL3-201ENST00000249007 MAP3K12Q12852 859 aa15.02■□□□□ -0
RFPL3-201ENST00000249007 PDE3AQ14432 1141 aa15.02■□□□□ -0
RFPL3-201ENST00000249007 IDI2Q9BXS1 227 aa15.02■□□□□ -0
RFPL3-201ENST00000249007 DDTLA6NHG4 134 aaPredicted RBP15.01□□□□□ -0.01
RFPL3-201ENST00000249007 LDHBP07195 334 aaKnown RBP15.01□□□□□ -0.01
RFPL3-201ENST00000249007 PUM3Q15397 648 aaKnown RBP15.01□□□□□ -0.01
RFPL3-201ENST00000249007 ZNF280CQ8ND82 737 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 FRMPD3Q5JV73 1810 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 RTP1P59025 263 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 CCL14Q16627 93 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 KAZALD1Q96I82 304 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 SUCLG2Q96I99 432 aa15.01□□□□□ -0.01
RFPL3-201ENST00000249007 RGS2P41220 211 aa15□□□□□ -0.01
RFPL3-201ENST00000249007 IRX3P78415 501 aaPredicted RBP15□□□□□ -0.01
RFPL3-201ENST00000249007 GPRC5AQ8NFJ5 357 aa15□□□□□ -0.01
RFPL3-201ENST00000249007 PRDM5Q9NQX1 630 aaPredicted RBP15□□□□□ -0.01
RFPL3-201ENST00000249007 ATP11BQ9Y2G3 1177 aa15□□□□□ -0.01
RFPL3-201ENST00000249007 RFX7Q2KHR2 1363 aa15□□□□□ -0.01
RFPL3-201ENST00000249007 PEX10O60683 326 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 FGFR2P21802 821 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 MAPK4P31152 587 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 CCAR1Q8IX12 1150 aaKnown RBP14.99□□□□□ -0.01
RFPL3-201ENST00000249007 USP6NLQ92738 828 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 BADQ92934 168 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 APBA2Q99767 749 aa14.99□□□□□ -0.01
RFPL3-201ENST00000249007 DNM1LO00429 736 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 ALDH1L1O75891 902 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 PICALMQ13492 652 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 GRIN2CQ14957 1233 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 ADAMTS19Q8TE59 1207 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 ATXN2LQ8WWM7 1075 aaKnown RBP14.98□□□□□ -0.01
RFPL3-201ENST00000249007 TBC1D2Q9BYX2 928 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 TXNRD2Q9NNW7 524 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 MUC6Q6W4X9 2439 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 XIRP2A4UGR9 3374 aa14.98□□□□□ -0.01
RFPL3-201ENST00000249007 MYH2Q9UKX2 1941 aa14.97□□□□□ -0.01
RFPL3-201ENST00000249007 FAM196BA6NMK8 535 aa14.97□□□□□ -0.01
RFPL3-201ENST00000249007 SLC5A1P13866 664 aa14.97□□□□□ -0.01
RFPL3-201ENST00000249007 LPAR1Q92633 364 aa14.97□□□□□ -0.01
RFPL3-201ENST00000249007 OSBPL5Q9H0X9 879 aaPredicted RBP14.97□□□□□ -0.01
RFPL3-201ENST00000249007 BICC1Q9H694 974 aaKnown RBP14.97□□□□□ -0.01
RFPL3-201ENST00000249007 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.97□□□□□ -0.01
RFPL3-201ENST00000249007 DDX4Q9NQI0 724 aaKnown RBP14.97□□□□□ -0.01
RFPL3-201ENST00000249007 DDX20Q9UHI6 824 aaKnown RBP14.97□□□□□ -0.01
RFPL3-201ENST00000249007 TBC1D12O60347 775 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 MSCO60682 206 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 NBPF7P0C2Y1 421 aaPredicted RBP14.96□□□□□ -0.01
RFPL3-201ENST00000249007 HERVK_113P62684 666 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 RABL6Q3YEC7 729 aaPredicted RBP14.96□□□□□ -0.01
RFPL3-201ENST00000249007 SH3D19Q5HYK7 790 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 MORN1Q5T089 497 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 SLC4A10Q6U841 1118 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 GPR142Q7Z601 462 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 KLHDC4Q8TBB5 520 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 LPIN2Q92539 896 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 RNPC3Q96LT9 517 aaKnown RBP14.96□□□□□ -0.01
RFPL3-201ENST00000249007 ASB2Q96Q27 587 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 UHRF1Q96T88 793 aaPredicted RBP14.96□□□□□ -0.01
RFPL3-201ENST00000249007 P2RX7Q99572 595 aaKnown RBP14.96□□□□□ -0.01
RFPL3-201ENST00000249007 SRCIN1Q9C0H9 1055 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 PORCNQ9H237 461 aa14.96□□□□□ -0.01
RFPL3-201ENST00000249007 GAKO14976 1311 aa14.96□□□□□ -0.02
RFPL3-201ENST00000249007 SALL1Q9NSC2 1324 aa14.96□□□□□ -0.02
RFPL3-201ENST00000249007 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 CNGA1P29973 690 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 MFSD14CQ5VZR4 134 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 PLEKHH3Q7Z736 793 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 THEGQ9P2T0 379 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 USP17L5A8MUK1 530 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 HOXA7P31268 230 aaPredicted RBP14.95□□□□□ -0.02
RFPL3-201ENST00000249007 ERVK-9P63128 1117 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 ERVK-24P63145 666 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 MTMR2Q13614 643 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 PPM1EQ8WY54 764 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 AS3MTQ9HBK9 375 aa14.95□□□□□ -0.02
RFPL3-201ENST00000249007 CWC22Q9HCG8 908 aaKnown RBP14.95□□□□□ -0.02
RFPL3-201ENST00000249007 GNL3LQ9NVN8 582 aaKnown RBP14.95□□□□□ -0.02
RFPL3-201ENST00000249007 RLFQ13129 1914 aa14.94□□□□□ -0.02
RFPL3-201ENST00000249007 ATAD5Q96QE3 1844 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms