RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 BOLA2Q9H3K6 86 aa25.68■■□□□ 1.7
HCFC1R1-201ENST00000248089 USP5P45974 858 aa25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 PKN2Q16513 984 aaKnown RBP25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 CCDC84Q86UT8 332 aaPredicted RBP25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 CD99L2Q8TCZ2 262 aa25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 ERO1AQ96HE7 468 aa25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 ZCCHC17Q9NP64 241 aaKnown RBP25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 PI4KBQ9UBF8 816 aa25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 TRIM17Q9Y577 477 aa25.67■■□□□ 1.7
HCFC1R1-201ENST00000248089 PDE6AP16499 860 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 SP3Q02447 781 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 SLC9C2Q5TAH2 1124 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 CERS3Q8IU89 383 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 TRIM34Q9BYJ4 488 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 PAG1Q9NWQ8 432 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 HERC5Q9UII4 1024 aaKnown RBP25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 PALD1Q9ULE6 856 aa25.66■■□□□ 1.7
HCFC1R1-201ENST00000248089 ZSWIM8A7E2V4 1837 aa25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 ATP5JP18859 108 aa25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 TMED8Q6PL24 325 aaPredicted RBP25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 CRACR2BQ8N4Y2 399 aaPredicted RBP25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 CRBNQ96SW2 442 aa25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 DDX60LQ5H9U9 1706 aaKnown RBP25.65■■□□□ 1.7
HCFC1R1-201ENST00000248089 TRIM75PA6NK02 468 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 PDHXO00330 501 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 CXCL11O14625 94 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 ANKRD23Q86SG2 305 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 DCTPP1Q9H773 170 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 HPS5Q9UPZ3 1129 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 PCDHB15Q9Y5E8 787 aa25.64■■□□□ 1.7
HCFC1R1-201ENST00000248089 ZNF532Q9HCE3 1301 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 MAGEB6P1A0A0J9YX57 407 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 HLA-DOAP06340 250 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 MOGSQ13724 837 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 FBXO46Q6PJ61 603 aaPredicted RBP25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 GADL1Q6ZQY3 521 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 OTOP1Q7RTM1 612 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 HAUS7Q99871 368 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 AFG3L2Q9Y4W6 797 aa25.63■■□□□ 1.69
HCFC1R1-201ENST00000248089 A0A0G2JLL6 359 aaPredicted RBP25.62■■□□□ 1.69
HCFC1R1-201ENST00000248089 CAP2P40123 477 aa25.62■■□□□ 1.69
HCFC1R1-201ENST00000248089 RRP1BQ14684 758 aaKnown RBP25.62■■□□□ 1.69
HCFC1R1-201ENST00000248089 PRRT2Q7Z6L0 340 aaPredicted RBP25.62■■□□□ 1.69
HCFC1R1-201ENST00000248089 HTTP42858 3142 aa25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 TLR2O60603 784 aa25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 RIOK1Q9BRS2 568 aaKnown RBP25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 DNAJC18Q9H819 358 aa25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 EFCC1Q9HA90 598 aa25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 LOC285556D6RIA3 1793 aa25.61■■□□□ 1.69
HCFC1R1-201ENST00000248089 FASTKD5Q7L8L6 764 aaKnown RBP25.6■■□□□ 1.69
HCFC1R1-201ENST00000248089 GPATCH3Q96I76 525 aa25.6■■□□□ 1.69
HCFC1R1-201ENST00000248089 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.6■■□□□ 1.69
HCFC1R1-201ENST00000248089 TCRBV5S4A2TA0A5A2 114 aa25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 CAP1Q01518 475 aa25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 GPAT2Q6NUI2 795 aa25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 FOXP4Q8IVH2 680 aaPredicted RBP25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 CRNKL1Q9BZJ0 848 aaKnown RBP25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 ECHDC1Q9NTX5 307 aa25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 CPA4Q9UI42 421 aa25.59■■□□□ 1.69
HCFC1R1-201ENST00000248089 ECM2O94769 699 aaPredicted RBP25.58■■□□□ 1.69
HCFC1R1-201ENST00000248089 TSHZ3Q63HK5 1081 aa25.58■■□□□ 1.69
HCFC1R1-201ENST00000248089 PARK7Q99497 189 aaKnown RBP25.58■■□□□ 1.69
HCFC1R1-201ENST00000248089 BAZ2AQ9UIF9 1905 aaKnown RBP25.58■■□□□ 1.69
HCFC1R1-201ENST00000248089 MYH8P13535 1937 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 GDF11O95390 407 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 SOX10P56693 466 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 SPP2Q13103 211 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 SLFNL1Q499Z3 407 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 LCORLQ8N3X6 602 aa25.57■■□□□ 1.68
HCFC1R1-201ENST00000248089 USP17L5A8MUK1 530 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 CYP2C8P10632 490 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 ADD2P35612 726 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 KIF22Q14807 665 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 METTL16Q86W50 562 aaKnown RBP25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 ZNF280CQ8ND82 737 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 ARMT1Q9H993 441 aa25.56■■□□□ 1.68
HCFC1R1-201ENST00000248089 MGAMO43451 1857 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 MBD4O95243 580 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 ASNSP08243 561 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 LACTBP83111 547 aaPredicted RBP25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 ARHGEF6Q15052 776 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 SHROOM1Q2M3G4 852 aaPredicted RBP25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 TBC1D2Q9BYX2 928 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 ARHGAP39Q9C0H5 1083 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 AS3MTQ9HBK9 375 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 SERPINB13Q9UIV8 391 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 PTPN22Q9Y2R2 807 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 ADGRA2Q96PE1 1338 aa25.55■■□□□ 1.68
HCFC1R1-201ENST00000248089 CHGBP05060 677 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 POLR3DP05423 398 aaPredicted RBP25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 JAG1P78504 1218 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 C17orf99Q6UX52 265 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 TTC6Q86TZ1 520 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 SDR42E1Q8WUS8 393 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 CENPFP49454 3210 aa25.54■■□□□ 1.68
HCFC1R1-201ENST00000248089 HMGCS2P54868 508 aa25.53■■□□□ 1.68
HCFC1R1-201ENST00000248089 TREML2Q5T2D2 321 aa25.53■■□□□ 1.68
HCFC1R1-201ENST00000248089 EHD4Q9H223 541 aa25.53■■□□□ 1.68
HCFC1R1-201ENST00000248089 MCM9Q9NXL9 1143 aa25.53■■□□□ 1.68
HCFC1R1-201ENST00000248089 ZBTB21Q9ULJ3 1066 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms