RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ISM2Q6H9L7 571 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 LRP2BPQ9P2M1 347 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 A0A0U1RQG5 324 aaPredicted RBP24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 ERICH2A1L162 156 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 BTBD18B2RXH4 712 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 LONRF3Q496Y0 759 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 DIS3L2Q8IYB7 885 aaKnown RBP24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 ZKSCAN3Q9BRR0 538 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 FOXP1Q9H334 677 aaPredicted RBP24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 TOMM22Q9NS69 142 aa24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 NIP7Q9Y221 180 aaKnown RBP eCLIP24.91■■□□□ 1.58
SH2D3A-201ENST00000245908 DEXIO95424 95 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 LMOD1P29536 600 aaPredicted RBP24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 KCNJ6P48051 423 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 MYL5Q02045 173 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 STK11IPQ8N1F8 1099 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 MIGA1Q8NAN2 632 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 A0A1B0GUL6 1792 aa24.9■■□□□ 1.58
SH2D3A-201ENST00000245908 LOC102724428A0A0B4J2F2 783 aa24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 CCDC196A0A1B0GTZ2 297 aa24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 TOB1P50616 345 aaPredicted RBP24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 SIK1P57059 783 aa24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 CRACR2BQ8N4Y2 399 aaPredicted RBP24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 ZNF592Q92610 1267 aa24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 TRMT1Q9NXH9 659 aaKnown RBP24.89■■□□□ 1.58
SH2D3A-201ENST00000245908 SFPQP23246 707 aaKnown RBP eCLIP24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 PPARAQ07869 468 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 ITPK1Q13572 414 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 CNNM3Q8NE01 707 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 AHDC1Q5TGY3 1603 aaPredicted RBP24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 ZNF804BA4D1E1 1349 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 COL4A1P02462 1669 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 ROBO1Q9Y6N7 1651 aa24.89■■□□□ 1.57
SH2D3A-201ENST00000245908 KIF2AO00139 706 aaPredicted RBP24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 RILPL1Q5EBL4 403 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 KCNJ14Q9UNX9 436 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 MYO1BO43795 1136 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 ATP1A3P13637 1013 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 CYP7A1P22680 504 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 ZNF654Q8IZM8 581 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 ANAPC4Q9UJX5 808 aa24.88■■□□□ 1.57
SH2D3A-201ENST00000245908 DDB1Q16531 1140 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 E4F1Q66K89 784 aaPredicted RBP24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 FOXP4Q8IVH2 680 aaPredicted RBP24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 FBXO2Q9UK22 296 aaPredicted RBP24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 NRAPQ86VF7 1730 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 CBFA2T2O43439 604 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 MYH6P13533 1939 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 PTPREP23469 700 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 MDM2Q00987 491 aaPredicted RBP24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 OLFM4Q6UX06 510 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 FANCBQ8NB91 859 aa24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 CDC5LQ99459 802 aaKnown RBP24.87■■□□□ 1.57
SH2D3A-201ENST00000245908 SPATA31A1Q5TZJ5 1347 aa24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 PSDA5PKW4 1024 aaPredicted RBP24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 ADGRA1Q86SQ6 560 aa24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 THRAP3Q9Y2W1 955 aaKnown RBP24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 PCDHA5Q9Y5H7 936 aa24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 ACSBG1Q96GR2 724 aa24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 UBAC1Q9BSL1 405 aa24.86■■□□□ 1.57
SH2D3A-201ENST00000245908 NRDCO43847 1150 aa24.85■■□□□ 1.57
SH2D3A-201ENST00000245908 SEC23AQ15436 765 aa24.85■■□□□ 1.57
SH2D3A-201ENST00000245908 HOOK1Q9UJC3 728 aaKnown RBP24.85■■□□□ 1.57
SH2D3A-201ENST00000245908 CACNA1SQ13698 1873 aa24.85■■□□□ 1.57
SH2D3A-201ENST00000245908 KIF18AQ8NI77 898 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 A0A0G2JS52 829 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 MAGEB6P1A0A0J9YX57 407 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 UBASH3AP57075 661 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 PPP2R5BQ15173 497 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 ZNF579Q8NAF0 562 aaKnown RBP24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 ESR2Q92731 530 aa24.84■■□□□ 1.57
SH2D3A-201ENST00000245908 DUOX1Q9NRD9 1551 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 NUP133Q8WUM0 1156 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 SDR42E1Q8WUS8 393 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 DPF2Q92785 391 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 PPP1R13BQ96KQ4 1090 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 COL1A1P02452 1464 aaPredicted RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 COL5A3P25940 1745 aaPredicted RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 TNKSO95271 1327 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 KDM4FA0A1W2PPD8 638 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 GRIN1Q05586 938 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 NR5A1Q13285 461 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 SPECC1Q5M775 1068 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 CMTR1Q8N1G2 835 aaKnown RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 CCDC82Q8N4S0 544 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 RNF26Q9BY78 433 aaPredicted RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 GNL3LQ9NVN8 582 aaKnown RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 IQSEC3Q9UPP2 1182 aaPredicted RBP24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 ZNF652Q9Y2D9 606 aa24.83■■□□□ 1.57
SH2D3A-201ENST00000245908 CASZ1Q86V15 1759 aa24.83■■□□□ 1.56
SH2D3A-201ENST00000245908 SCN7AQ01118 1682 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 MINDY4BA8MYZ0 360 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 SERPINC1P01008 464 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 BMP6P22004 513 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 RIOK1Q9BRS2 568 aaKnown RBP24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 RAI14Q9P0K7 980 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 ABCF2Q9UG63 623 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 CEP131Q9UPN4 1083 aa24.82■■□□□ 1.56
SH2D3A-201ENST00000245908 PCDHB6Q9Y5E3 794 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms