RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 LY9Q9HBG7 655 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 MKNK2Q9HBH9 465 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 SLC12A7Q9Y666 1083 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 FLT1P17948 1338 aa21.96■■□□□ 1.11
TNFSF9-201ENST00000245817 CPLX1O14810 134 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 STX6O43752 255 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 HMGN5P82970 282 aaKnown RBP21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 LARP1BQ659C4 914 aaKnown RBP21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 SGMS1Q86VZ5 419 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 NKX2-3Q8TAU0 364 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 JDP2Q8WYK2 163 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 ZKSCAN3Q9BRR0 538 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 SERPINA10Q9UK55 444 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 ZNRF3Q9ULT6 936 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 GOLGA6L22H0YM25 854 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 SMIM22K7EJ46 135 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 YBX3P16989 372 aaKnown RBP eCLIP21.95■■□□□ 1.15e-8■■■■□ 25
TNFSF9-201ENST00000245817 SYT1P21579 422 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 MCM4P33991 863 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 PICALMQ13492 652 aa21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 FOXD4L5Q5VV16 416 aaPredicted RBP21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 FOXD4L4Q8WXT5 416 aaPredicted RBP21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.95■■□□□ 1.1
TNFSF9-201ENST00000245817 BAZ2AQ9UIF9 1905 aaKnown RBP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 ZBTB43O43298 467 aa21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 RAD17O75943 681 aa21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 METAP2P50579 478 aaKnown RBP eCLIP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 APOBEC3HQ6NTF7 200 aaKnown RBP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 RSBN1LQ6PCB5 846 aaPredicted RBP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 ZSCAN10Q96SZ4 725 aaPredicted RBP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 NCOA5Q9HCD5 579 aaKnown RBP21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 ZDHHC9Q9Y397 364 aa21.94■■□□□ 1.1
TNFSF9-201ENST00000245817 DCAF8L1A6NGE4 600 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 TSPY2A6NKD2 308 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 DDX11L8A8MPP1 907 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 CDC42EP5Q6NZY7 148 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 CPLX2Q6PUV4 134 aaKnown RBP21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 APOA5Q6Q788 366 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 TTC6Q86TZ1 520 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 ZNF444Q8N0Y2 327 aaPredicted RBP21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 HDAC9Q9UKV0 1011 aa21.93■■□□□ 1.1
TNFSF9-201ENST00000245817 TNKSO95271 1327 aa21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 GRIN3BO60391 1043 aa21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 VIL1P09327 827 aaKnown RBP21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 ARHGAP27Q6ZUM4 889 aa21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 NSUN7Q8NE18 718 aaKnown RBP21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 ROBO3Q96MS0 1386 aa21.92■■□□□ 1.1
TNFSF9-201ENST00000245817 PTPDC1A2A3K4 754 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 PSMD14O00487 310 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 JAK2O60674 1132 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 ZSCAN22P10073 491 aaPredicted RBP21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 PLCD1P51178 756 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 CLEC17AQ6ZS10 378 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 OGFOD1Q8N543 542 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 SMARCC2Q8TAQ2 1214 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 DDX11Q96FC9 970 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 HPS5Q9UPZ3 1129 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 CDKL5O76039 1030 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 PTMSP20962 102 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 EVX2Q03828 476 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 IFIT1BQ5T764 474 aaKnown RBP21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 MICU3Q86XE3 530 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 RAB11FIP4Q86YS3 637 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 DYNLL2Q96FJ2 89 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
TNFSF9-201ENST00000245817 VPS37CA5D8V6 355 aaPredicted RBP21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 GOLGA8AA7E2F4 631 aa21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 DTNBO60941 627 aa21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 WDHD1O75717 1129 aaPredicted RBP21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 BAG4O95429 457 aaKnown RBP21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 CCDC178Q5BJE1 867 aa21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 FAM47AQ5JRC9 791 aa21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 SENP2Q9HC62 589 aa21.9■■□□□ 1.1
TNFSF9-201ENST00000245817 CFAP100Q494V2 611 aa21.89■■□□□ 1.1
TNFSF9-201ENST00000245817 LAMB1P07942 1786 aa21.89■■□□□ 1.09
TNFSF9-201ENST00000245817 SCN9AQ15858 1988 aa21.89■■□□□ 1.09
TNFSF9-201ENST00000245817 FER1L6Q2WGJ9 1857 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 H3BQV1 296 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 CTDNEP1O95476 244 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 HLA-DOAP06340 250 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 TSPY3P0CV98 308 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 TSPY8P0CW00 308 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 TFAP4Q01664 338 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 SEC23AQ15436 765 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 IFFO2Q5TF58 517 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 C16orf86Q6ZW13 317 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 CATIPQ7Z7H3 387 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 NAV1Q8NEY1 1877 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 CCDC196A0A1B0GTZ2 297 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 NFKBIEO00221 500 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 CDK8P49336 464 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 RCAN1P53805 252 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 TNIP1Q15025 636 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 CIAPIN1Q6FI81 312 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 ENAHQ8N8S7 591 aaPredicted RBP21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 AGBL3Q8NEM8 1001 aa21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 OSBPL5Q9H0X9 879 aaPredicted RBP21.88■■□□□ 1.09
TNFSF9-201ENST00000245817 LTBP3Q9NS15 1303 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 RXRAP19793 462 aa21.87■■□□□ 1.09
TNFSF9-201ENST00000245817 CCDC144CPQ8IYA2 1237 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms