RNA–Protein interactions for RNA: ENST00000243040.10

PFDN5-201, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-201ENST00000243040 PLEKHM2Q8IWE5 1019 aa12.82□□□□□ -0.36
PFDN5-201ENST00000243040 ZKSCAN4Q969J2 545 aaPredicted RBP12.82□□□□□ -0.36
PFDN5-201ENST00000243040 BEGAINQ9BUH8 593 aa12.82□□□□□ -0.36
PFDN5-201ENST00000243040 PUS7LQ9H0K6 701 aaKnown RBP12.82□□□□□ -0.36
PFDN5-201ENST00000243040 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 TESPA1A2RU30 521 aaPredicted RBP12.81□□□□□ -0.36
PFDN5-201ENST00000243040 RNF113AO15541 343 aaKnown RBP12.81□□□□□ -0.36
PFDN5-201ENST00000243040 HLA-DOAP06340 250 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 SLURP2P0DP57 97 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 INHBEP58166 350 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 PPATQ06203 517 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 MKRN3Q13064 507 aaKnown RBP12.81□□□□□ -0.36
PFDN5-201ENST00000243040 PPIL2Q13356 520 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 SCYL3Q8IZE3 742 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 EVI5LQ96CN4 794 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 FSD1Q9BTV5 496 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 EHD4Q9H223 541 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 ARMT1Q9H993 441 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.81□□□□□ -0.36
PFDN5-201ENST00000243040 ATP8A2Q9NTI2 1148 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 PALD1Q9ULE6 856 aa12.81□□□□□ -0.36
PFDN5-201ENST00000243040 FAM196BA6NMK8 535 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 CTNND1O60716 968 aaKnown RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 HSPA8P11142 646 aaKnown RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 CTCFP49711 727 aaPredicted RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 FOXP4Q8IVH2 680 aaPredicted RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 SDR42E1Q8WUS8 393 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 OSBP2Q969R2 916 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 OTUD5Q96G74 571 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 DCP1AQ9NPI6 582 aaPredicted RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 SAP30BPQ9UHR5 308 aaKnown RBP12.8□□□□□ -0.36
PFDN5-201ENST00000243040 TAOK2Q9UL54 1235 aa12.8□□□□□ -0.36
PFDN5-201ENST00000243040 CENPBP07199 599 aaPredicted RBP12.79□□□□□ -0.36
PFDN5-201ENST00000243040 PDE4AP27815 886 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 GTF2A2P52657 109 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 ZMYM1Q5SVZ6 1142 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 TTC6Q86TZ1 520 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 MS4A4AQ96JQ5 239 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 STRBPQ96SI9 672 aaKnown RBP12.79□□□□□ -0.36
PFDN5-201ENST00000243040 CFHR5Q9BXR6 569 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
PFDN5-201ENST00000243040 IRF6O14896 467 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 GPAA1O43292 621 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 CAP2P40123 477 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 GABPAQ06546 454 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-201ENST00000243040 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 PICK1Q9NRD5 415 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 GINM1Q9NU53 330 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 RNF186Q9NXI6 227 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 MCM9Q9NXL9 1143 aa12.78□□□□□ -0.36
PFDN5-201ENST00000243040 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-201ENST00000243040 GREB1LQ9C091 1923 aaPredicted RBP12.78□□□□□ -0.36
PFDN5-201ENST00000243040 M0R2C6 588 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 IGF2BP3O00425 579 aaKnown RBP eCLIP12.77□□□□□ -0.37
PFDN5-201ENST00000243040 PRKAB2O43741 272 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 ALDH1A1P00352 501 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 PTPRAP18433 802 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 GNAT2P19087 354 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 PLCD1P51178 756 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 RRP1BQ14684 758 aaKnown RBP12.77□□□□□ -0.37
PFDN5-201ENST00000243040 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 GIMAP6Q6P9H5 292 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 IFNL1Q8IU54 200 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 BRI3BPQ8WY22 251 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 TRIM34Q9BYJ4 488 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 PRDM10Q9NQV6 1147 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 ARPP21Q9UBL0 812 aaPredicted RBP12.77□□□□□ -0.37
PFDN5-201ENST00000243040 SLC4A4Q9Y6R1 1079 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 CASP8AP2Q9UKL3 1982 aa12.77□□□□□ -0.37
PFDN5-201ENST00000243040 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 CCL15-CCL14A0A0B4J2E2 113 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 CXCL11O14625 94 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 POLR3DP05423 398 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-201ENST00000243040 ASNSP08243 561 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 CETPP11597 493 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 SNAPC2Q13487 334 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 CCL15Q16663 113 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 SLC4A8Q2Y0W8 1093 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 NOM1Q5C9Z4 860 aaKnown RBP12.76□□□□□ -0.37
PFDN5-201ENST00000243040 CENPQQ7L2Z9 268 aaPredicted RBP12.76□□□□□ -0.37
PFDN5-201ENST00000243040 DDRGK1Q96HY6 314 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 ZCCHC17Q9NP64 241 aaKnown RBP12.76□□□□□ -0.37
PFDN5-201ENST00000243040 AFG3L2Q9Y4W6 797 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 ROBO3Q96MS0 1386 aa12.76□□□□□ -0.37
PFDN5-201ENST00000243040 GSG1L2A8MUP6 293 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 TRIM6-TRIM34B2RNG4 842 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 TRPA1O75762 1119 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 NEFLP07196 543 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 SHMT1P34896 483 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 LBX1P52954 281 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 SBK1Q52WX2 424 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 C12orf60Q5U649 245 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 OTUD7BQ6GQQ9 843 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 AMOTL1Q8IY63 956 aa12.75□□□□□ -0.37
PFDN5-201ENST00000243040 SEC62Q99442 399 aaKnown RBP12.75□□□□□ -0.37
PFDN5-201ENST00000243040 PTPN18Q99952 460 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms