RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 C3P01024 1663 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 PIK3R4Q99570 1358 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 A0A1W2PP55 124 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 ADARB2-AS1A8MUL3 147 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 TCF3P15923 654 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 PCBP4P57723 403 aaKnown RBP9.83□□□□□ -0.84
CXCR4-201ENST00000241393 GNAI1P63096 354 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 SRSF11Q05519 484 aaKnown RBP9.83□□□□□ -0.84
CXCR4-201ENST00000241393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.83□□□□□ -0.84
CXCR4-201ENST00000241393 CACTIN-AS1Q8N1I8 211 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 TMEM87AQ8NBN3 555 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 COG3Q96JB2 828 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 OSMRQ99650 979 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 ZBTB40Q9NUA8 1239 aa9.83□□□□□ -0.84
CXCR4-201ENST00000241393 NOB1Q9ULX3 412 aaKnown RBP9.83□□□□□ -0.84
CXCR4-201ENST00000241393 ITSN1Q15811 1721 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 PTCH1Q13635 1447 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 ZNF853P0CG23 659 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 EIF2AK2P19525 551 aaKnown RBP9.82□□□□□ -0.84
CXCR4-201ENST00000241393 GAS6Q14393 721 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 PRPF40BQ6NWY9 871 aaKnown RBP9.82□□□□□ -0.84
CXCR4-201ENST00000241393 FAM161BQ96MY7 647 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 COL25A1Q9BXS0 654 aaPredicted RBP9.82□□□□□ -0.84
CXCR4-201ENST00000241393 METTL5Q9NRN9 209 aaKnown RBP9.82□□□□□ -0.84
CXCR4-201ENST00000241393 PLEKHG1Q9ULL1 1385 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 UBR1Q8IWV7 1749 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 NRKQ7Z2Y5 1582 aa9.82□□□□□ -0.84
CXCR4-201ENST00000241393 C2CD2LO14523 706 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 IRS1P35568 1242 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 ADH7P40394 386 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
CXCR4-201ENST00000241393 FAM35AQ86V20 835 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 ITPRIPQ8IWB1 547 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 CEP120Q8N960 986 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 TBC1D32Q96NH3 1257 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 HCN2Q9UL51 889 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 SLC6A14Q9UN76 642 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 ADAMTS13Q76LX8 1427 aa9.81□□□□□ -0.84
CXCR4-201ENST00000241393 ELOA3CA0A087WX78 387 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-201ENST00000241393 ELOA3DA6NLF2 546 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-201ENST00000241393 MLECQ14165 292 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 GRM2Q14416 872 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 NFKBIBQ15653 356 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 ELOA3BQ3SY89 546 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 ELMSAN1Q6PJG2 1045 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 SLCO4C1Q6ZQN7 724 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 TMEM57Q8N5G2 664 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 ELOA3Q8NG57 546 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 OXCT2Q9BYC2 517 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-201ENST00000241393 KIF24Q5T7B8 1368 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 TOPAZ1Q8N9V7 1692 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 NME9Q86XW9 330 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 TMEM102Q8N9M5 508 aaPredicted RBP9.8□□□□□ -0.84
CXCR4-201ENST00000241393 PBX4Q9BYU1 374 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 FRRS1LQ9P0K9 344 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 PPM1HQ9ULR3 514 aa9.8□□□□□ -0.84
CXCR4-201ENST00000241393 NEURL1BA8MQ27 555 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 PDE2AO00408 941 aaPredicted RBP9.79□□□□□ -0.84
CXCR4-201ENST00000241393 VAMP4O75379 141 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 RECKO95980 971 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 MLLT1Q03111 559 aaPredicted RBP9.79□□□□□ -0.84
CXCR4-201ENST00000241393 NXPE4Q6UWF7 544 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 DTHD1Q6ZMT9 781 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 ZKSCAN3Q9BRR0 538 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 DZANK1Q9NVP4 752 aa9.79□□□□□ -0.84
CXCR4-201ENST00000241393 ROBO2Q9HCK4 1378 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 EIF4EBP3O60516 100 aaPredicted RBP9.78□□□□□ -0.84
CXCR4-201ENST00000241393 USP17L7P0C7H9 530 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 PTPN12Q05209 780 aaKnown RBP9.78□□□□□ -0.84
CXCR4-201ENST00000241393 PI16Q6UXB8 463 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 GPR161Q8N6U8 529 aaKnown RBP9.78□□□□□ -0.84
CXCR4-201ENST00000241393 PHACTR3Q96KR7 559 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 GGA1Q9UJY5 639 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 OVOS2A0A0J9YW53 1432 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 OVOS2Q6IE36 1432 aa9.78□□□□□ -0.84
CXCR4-201ENST00000241393 TMEM238LA0A1B0GVL6 79 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 CPB1P15086 417 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 PTPRAP18433 802 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 ST13P50502 369 aaKnown RBP9.77□□□□□ -0.84
CXCR4-201ENST00000241393 NUCB1Q02818 461 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 PEAR1Q5VY43 1037 aaPredicted RBP9.77□□□□□ -0.84
CXCR4-201ENST00000241393 KANK3Q6NY19 840 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 CCNJLQ8IV13 435 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 GCC1Q96CN9 775 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 OSBPL7Q9BZF2 842 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 API5Q9BZZ5 524 aaKnown RBP9.77□□□□□ -0.84
CXCR4-201ENST00000241393 BHLHE41Q9C0J9 482 aaPredicted RBP9.77□□□□□ -0.84
CXCR4-201ENST00000241393 LATS2Q9NRM7 1088 aa9.77□□□□□ -0.84
CXCR4-201ENST00000241393 ABCC4O15439 1325 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 PRR36Q9H6K5 1346 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 USP31Q70CQ4 1352 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 NALCNQ8IZF0 1738 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 HMOX1P09601 288 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 ZNF76P36508 570 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 TAF1CQ15572 869 aaPredicted RBP9.77□□□□□ -0.85
CXCR4-201ENST00000241393 COL13A1Q5TAT6 717 aaPredicted RBP9.77□□□□□ -0.85
CXCR4-201ENST00000241393 HFE2Q6ZVN8 426 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 PLD4Q96BZ4 506 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 LRRC4BQ9NT99 713 aa9.77□□□□□ -0.85
CXCR4-201ENST00000241393 ARHGAP23Q9P227 1491 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms