RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ASIC2Q16515 512 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 SLC9C1Q4G0N8 1177 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CEP85Q6P2H3 762 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 PAXIP1Q6ZW49 1069 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 RAB17Q9H0T7 212 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 IQSEC3Q9UPP2 1182 aaPredicted RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 SLC8A1P32418 973 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 PPP4R1Q8TF05 950 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 PLIN2Q99541 437 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 ANGEL1Q9UNK9 670 aaKnown RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 BACH1O14867 736 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 PRAG1Q86YV5 1406 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 MLKLQ8NB16 471 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 Q9H521 79 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CACYBPQ9HB71 228 aaKnown RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 URB2Q14146 1524 aaKnown RBP7.5□□□□□ -1.21
CSMD2-201ENST00000241312 PPFIA2O75334 1257 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 KRT71Q3SY84 523 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC125Q86Z20 511 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 FNBP1Q96RU3 617 aa7.5□□□□□ -1.21
CSMD2-201ENST00000241312 CHMLP26374 656 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 FANCCQ00597 558 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 BRD3Q15059 726 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 PLEKHM2Q8IWE5 1019 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 MUM1Q2TAK8 710 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 HOMEZQ8IX15 550 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 ZKSCAN3Q9BRR0 538 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 PLXNC1O60486 1568 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 MYH10P35580 1976 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 SBNO2Q9Y2G9 1366 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 RGS16O15492 202 aaPredicted RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 CSGALNACT2Q8N6G5 542 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 ANKRD2Q9GZV1 360 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 DCTPP1Q9H773 170 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 GPIHBP1Q8IV16 184 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC105Q8IYK2 499 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 KIF1BO60333 1816 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 OAS2P29728 719 aaKnown RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 PEX26Q7Z412 305 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 CABS1Q96KC9 395 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 LZTS2Q9BRK4 669 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 NYXQ9GZU5 481 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 CPA1P15085 419 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 PARP2Q9UGN5 583 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 MAST1Q9Y2H9 1570 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 BAZ2BQ9UIF8 2168 aaKnown RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 FAM170AA1A519 330 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 TNFAIP3P21580 790 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 MRPL50Q8N5N7 158 aaKnown RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 ADGRF5Q8IZF2 1346 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 A0A1B0GVL5 298 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 RIOK3O14730 519 aaKnown RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 RNASE9P60153 205 aaKnown RBP7.49□□□□□ -1.21
CSMD2-201ENST00000241312 SFMBT2Q5VUG0 894 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 SSH2Q76I76 1423 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 GRIN2AQ12879 1464 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 ANKRD20A3Q5VUR7 823 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 SETDB2Q96T68 719 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 HELLSQ9NRZ9 838 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 CTTNBP2NLQ9P2B4 639 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 KLHL14Q9P2G3 628 aa7.49□□□□□ -1.21
CSMD2-201ENST00000241312 MGEA5O60502 916 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 SATB1Q01826 763 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RPS6KA1Q15418 735 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 HGSO14964 777 aaPredicted RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 FOXO3O43524 673 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 LONRF3Q496Y0 759 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 DDX41Q9UJV9 622 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 FAM212AQ96EL1 285 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 CCDC51Q96ER9 411 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 PPP2R5BQ15173 497 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 PPP1R21Q6ZMI0 780 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 CDAN1Q8IWY9 1227 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 MAPKBP1O60336 1514 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 CUL4BQ13620 913 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 KDM2BQ8NHM5 1336 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 NCAPGQ9BPX3 1015 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 TSPYL2Q9H2G4 693 aaPredicted RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RIMS2Q9UQ26 1411 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 HIP1RO75146 1068 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 POSTNQ15063 836 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 DCUN1D2Q6PH85 259 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 C14orf93Q9H972 538 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 FAN1Q9Y2M0 1017 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RNF40O75150 1001 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 BCRP11274 1271 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 TMEM87BQ96K49 555 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 EVI5O60447 810 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 LDHBP07195 334 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RPS6KB1P23443 525 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 YWHAEP62258 255 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RXRAP19793 462 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 AMOTL2Q9Y2J4 779 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 CCNT1O60563 726 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 ERCC3P19447 782 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 ZNF445P59923 1031 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 TRIM58Q8NG06 486 aa7.48□□□□□ -1.21
CSMD2-201ENST00000241312 PRPF31Q8WWY3 499 aaKnown RBP7.48□□□□□ -1.21
CSMD2-201ENST00000241312 NFE2L3Q9Y4A8 694 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms