RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RPAP1Q9BWH6 1393 aaPredicted RBP13.61□□□□□ -0.23
SF3B6-201ENST00000233468 PDE6AP16499 860 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 RGS3P49796 1198 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 PDE1AP54750 535 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 UBE3CQ15386 1083 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 NBPF12Q5TAG4 269 aaPredicted RBP13.61□□□□□ -0.23
SF3B6-201ENST00000233468 ZNF467Q7Z7K2 595 aaPredicted RBP13.61□□□□□ -0.23
SF3B6-201ENST00000233468 ZSCAN29Q8IWY8 852 aaPredicted RBP13.61□□□□□ -0.23
SF3B6-201ENST00000233468 KBTBD3Q8NAB2 608 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 ZNF384Q8TF68 577 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 SLC10A4Q96EP9 437 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 TMEM39BQ9GZU3 492 aa13.61□□□□□ -0.23
SF3B6-201ENST00000233468 MAGEB6P1A0A0J9YX57 407 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 GJA5P36382 358 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 RHBDL3P58872 404 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 SREBF2Q12772 1141 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 TCP10Q12799 353 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 PICALMQ13492 652 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 PI4K2BQ8TCG2 481 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 EVI5LQ96CN4 794 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 DHX36Q9H2U1 1008 aaKnown RBP13.6□□□□□ -0.23
SF3B6-201ENST00000233468 ZNF532Q9HCE3 1301 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 BRCA2P51587 3418 aa13.6□□□□□ -0.23
SF3B6-201ENST00000233468 IGF2BP3O00425 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 FKTNO75072 461 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 WDHD1O75717 1129 aaPredicted RBP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 ADD2P35612 726 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 USP5P45974 858 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 NFIAQ12857 509 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 PKN2Q16513 984 aaKnown RBP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 MAP3K11Q16584 847 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 TSHZ3Q63HK5 1081 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 CENPQQ7L2Z9 268 aaPredicted RBP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 MIGA1Q8NAN2 632 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 OTUD7AQ8TE49 926 aaPredicted RBP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 DDRGK1Q96HY6 314 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 WNK4Q96J92 1243 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 TEPSINQ96N21 525 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 CRNKL1Q9BZJ0 848 aaKnown RBP13.59□□□□□ -0.23
SF3B6-201ENST00000233468 OSBPL3Q9H4L5 887 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 FAM198AQ9UFP1 575 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 SALL3Q9BXA9 1300 aa13.59□□□□□ -0.23
SF3B6-201ENST00000233468 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 ATN1P54259 1190 aaPredicted RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 NOM1Q5C9Z4 860 aaKnown RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 FBXO46Q6PJ61 603 aaPredicted RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 ADGRA1Q86SQ6 560 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 CDAN1Q8IWY9 1227 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 ANKRD13AQ8IZ07 590 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 SH3RF3Q8TEJ3 882 aaPredicted RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 EDC3Q96F86 508 aaKnown RBP13.58□□□□□ -0.24
SF3B6-201ENST00000233468 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 FSD1Q9BTV5 496 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 CFHR5Q9BXR6 569 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
SF3B6-201ENST00000233468 TCRBV5S4A2TA0A5A2 114 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 TTLL13PA6NNM8 815 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 RNF113AO15541 343 aaKnown RBP13.57□□□□□ -0.24
SF3B6-201ENST00000233468 HLA-DOAP06340 250 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 CAP1Q01518 475 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 PLEKHM2Q8IWE5 1019 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 AMOTL1Q8IY63 956 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 TGFBRAP1Q8WUH2 860 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 TMEM106CQ9BVX2 250 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 OSBPL5Q9H0X9 879 aaPredicted RBP13.57□□□□□ -0.24
SF3B6-201ENST00000233468 CSADQ9Y600 493 aa13.57□□□□□ -0.24
SF3B6-201ENST00000233468 MANSC4A6NHS7 340 aaPredicted RBP13.56□□□□□ -0.24
SF3B6-201ENST00000233468 TRIM6-TRIM34B2RNG4 842 aa13.56□□□□□ -0.24
SF3B6-201ENST00000233468 DYNLL1P63167 89 aaKnown RBP13.56□□□□□ -0.24
SF3B6-201ENST00000233468 MAP3K9P80192 1104 aa13.56□□□□□ -0.24
SF3B6-201ENST00000233468 APPBP2Q92624 585 aa13.56□□□□□ -0.24
SF3B6-201ENST00000233468 PTPN18Q99952 460 aa13.56□□□□□ -0.24
SF3B6-201ENST00000233468 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
SF3B6-201ENST00000233468 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
SF3B6-201ENST00000233468 KIAA0100Q14667 2235 aaKnown RBP13.56□□□□□ -0.24
SF3B6-201ENST00000233468 MYH13Q9UKX3 1938 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 TBC1D12O60347 775 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 GNAT2P19087 354 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 OTOP1Q7RTM1 612 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 TTC6Q86TZ1 520 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 FOXP4Q8IVH2 680 aaPredicted RBP13.55□□□□□ -0.24
SF3B6-201ENST00000233468 MAPKAPK5Q8IW41 473 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 DDX4Q9NQI0 724 aaKnown RBP13.55□□□□□ -0.24
SF3B6-201ENST00000233468 ATP8A2Q9NTI2 1148 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 HERC5Q9UII4 1024 aaKnown RBP13.55□□□□□ -0.24
SF3B6-201ENST00000233468 TAOK2Q9UL54 1235 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 TRIM17Q9Y577 477 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 FLT1P17948 1338 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 RFX7Q2KHR2 1363 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 ATRNL1Q5VV63 1379 aa13.55□□□□□ -0.24
SF3B6-201ENST00000233468 COL2A1P02458 1487 aaPredicted RBP13.55□□□□□ -0.24
SF3B6-201ENST00000233468 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 HIP1O00291 1037 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 MBD4O95243 580 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 ALDH1A1P00352 501 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 ZBTB48P10074 688 aaPredicted RBP13.54□□□□□ -0.24
SF3B6-201ENST00000233468 INHBEP58166 350 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 CRHR2Q13324 411 aa13.54□□□□□ -0.24
SF3B6-201ENST00000233468 MIGA2Q7L4E1 593 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms