RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 ATP2A1O14983 1001 aa15.44■□□□□ 0.06
HCFC2-201ENST00000229330 DTHD1Q6ZMT9 781 aa15.44■□□□□ 0.06
HCFC2-201ENST00000229330 MORC2Q9Y6X9 1032 aaPredicted RBP15.44■□□□□ 0.06
HCFC2-201ENST00000229330 TBCAO75347 108 aaKnown RBP15.44■□□□□ 0.06
HCFC2-201ENST00000229330 MAGEA9P43362 315 aa15.44■□□□□ 0.06
HCFC2-201ENST00000229330 SLFNL1Q499Z3 407 aa15.44■□□□□ 0.06
HCFC2-201ENST00000229330 FBXO18Q8NFZ0 1043 aa15.44■□□□□ 0.06
HCFC2-201ENST00000229330 CALM1P0DP23 149 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 CALM2P0DP24 149 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 CALM3P0DP25 149 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 PPARDQ03181 441 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 PSMB7Q99436 277 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 BICC1Q9H694 974 aaKnown RBP15.43■□□□□ 0.06
HCFC2-201ENST00000229330 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 NAP1L3Q99457 506 aaPredicted RBP15.43■□□□□ 0.06
HCFC2-201ENST00000229330 PARD6BQ9BYG5 372 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.43■□□□□ 0.06
HCFC2-201ENST00000229330 ACTN4O43707 911 aaKnown RBP15.43■□□□□ 0.06
HCFC2-201ENST00000229330 MAGEA1P43355 309 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 PPP1R7Q15435 360 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 MCTP2Q6DN12 878 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 SYCP3Q8IZU3 236 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 RGS22Q8NE09 1264 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 MYO5CQ9NQX4 1742 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 RNF40O75150 1001 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 IL13P35225 146 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 TNIP1Q15025 636 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 ZNF174Q15697 407 aa15.43■□□□□ 0.06
HCFC2-201ENST00000229330 TMEM110-MUSTN1A8MSY1 372 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 CHL1O00533 1208 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 MPHOSPH10O00566 681 aaKnown RBP15.42■□□□□ 0.06
HCFC2-201ENST00000229330 MYSM1Q5VVJ2 828 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 VSIG1Q86XK7 387 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 KLHL7Q8IXQ5 586 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 MTUS1Q9ULD2 1270 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 IRX5P78411 483 aaPredicted RBP15.42■□□□□ 0.06
HCFC2-201ENST00000229330 C11orf57Q6ZUT1 292 aaPredicted RBP15.42■□□□□ 0.06
HCFC2-201ENST00000229330 FANCLQ9NW38 375 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 MAPK8IP1Q9UQF2 711 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 RAD51AP2Q09MP3 1159 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 TAOK1Q7L7X3 1001 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 CSGALNACT2Q8N6G5 542 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 GNAQP50148 359 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 PTH1RQ03431 593 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 HEATR3Q7Z4Q2 680 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 KDM5DQ9BY66 1539 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 PTPRTO14522 1441 aa15.42■□□□□ 0.06
HCFC2-201ENST00000229330 NEDD9Q14511 834 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 KRT71Q3SY84 523 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 TACO1Q9BSH4 297 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 SPATS2LQ9NUQ6 558 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 CFAP65Q6ZU64 1925 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 CDC5LQ99459 802 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 IL2RBP14784 551 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 PEX19P40855 299 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 SEPT6Q14141 434 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 KRT40Q6A162 431 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 DIS3L2Q8IYB7 885 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 RNF10Q8N5U6 811 aaKnown RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 PLIN2Q99541 437 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 CIB2O75838 187 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 ARID4AP29374 1257 aaPredicted RBP15.41■□□□□ 0.06
HCFC2-201ENST00000229330 GSTA5Q7RTV2 222 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 PLCB1Q9NQ66 1216 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 PCDHA7Q9UN72 937 aa15.41■□□□□ 0.06
HCFC2-201ENST00000229330 RAPGEF1Q13905 1077 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 MIPOL1Q8TD10 442 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 DEXIO95424 95 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 CMA1P23946 247 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 VWA3BQ502W6 1294 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 GKAP1Q5VSY0 366 aaPredicted RBP15.4■□□□□ 0.06
HCFC2-201ENST00000229330 MMS22LQ6ZRQ5 1243 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 CLEC17AQ6ZS10 378 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 TMEM87AQ8NBN3 555 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 HAUS4Q9H6D7 363 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 OR8K1Q8NGG5 319 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 TMEM87BQ96K49 555 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 ODF2LQ9ULJ1 636 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 GUCY2FP51841 1108 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 KMT5BQ4FZB7 885 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 TRIM58Q8NG06 486 aa15.4■□□□□ 0.06
HCFC2-201ENST00000229330 ANGEL1Q9UNK9 670 aaKnown RBP15.4■□□□□ 0.06
HCFC2-201ENST00000229330 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
HCFC2-201ENST00000229330 CEP104O60308 925 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 NDUFA8P51970 172 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 APBA1Q02410 837 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 ERMNQ8TAM6 284 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 CUL5Q93034 780 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SERTAD1Q9UHV2 236 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 FRMD3A2A2Y4 597 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 TTC19Q6DKK2 380 aaPredicted RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 JPH2Q9BR39 696 aaPredicted RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 HGSO14964 777 aaPredicted RBP15.39■□□□□ 0.05
HCFC2-201ENST00000229330 CYP7A1P22680 504 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 PDE4DQ08499 809 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 SEL1L2Q5TEA6 688 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 NELFBQ8WX92 580 aa15.39■□□□□ 0.05
HCFC2-201ENST00000229330 ZNF622Q969S3 477 aaKnown RBP eCLIP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms