RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
CDCA3-201ENST00000229265 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
CDCA3-201ENST00000229265 HTTP42858 3142 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 CLRN2A0PK11 232 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 FSD2A1L4K1 749 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 UBE2Q2LH0YL09 131 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 M0R2C6 588 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 PDE6AP16499 860 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 MRE11P49959 708 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 FGD1P98174 961 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 CCDC129Q6ZRS4 1044 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 CERS3Q8IU89 383 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 SMARCC2Q8TAQ2 1214 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 GTF3C6Q969F1 213 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 SYAP1Q96A49 352 aaPredicted RBP12.54□□□□□ -0.4
CDCA3-201ENST00000229265 AIDAQ96BJ3 306 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 TMEM87BQ96K49 555 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 NDUFB9Q9Y6M9 179 aa12.54□□□□□ -0.4
CDCA3-201ENST00000229265 G3V3G9 751 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 CAPN15O75808 1086 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 F13A1P00488 732 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 SLURP2P0DP57 97 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 HUNKP57058 714 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 RASGRF1Q13972 1273 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 PPP2R5BQ15173 497 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 SPTY2D1Q68D10 685 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-201ENST00000229265 PAXIP1Q6ZW49 1069 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-201ENST00000229265 CCDC83Q8IWF9 413 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 KRT23Q9C075 422 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 R3HDMLQ9H3Y0 253 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 GBA2Q9HCG7 927 aaPredicted RBP12.53□□□□□ -0.4
CDCA3-201ENST00000229265 PIH1D3Q9NQM4 214 aaKnown RBP12.53□□□□□ -0.4
CDCA3-201ENST00000229265 ZNF532Q9HCE3 1301 aa12.53□□□□□ -0.4
CDCA3-201ENST00000229265 MYH13Q9UKX3 1938 aa12.52□□□□□ -0.4
CDCA3-201ENST00000229265 PRPF40AO75400 957 aaKnown RBP12.52□□□□□ -0.41
CDCA3-201ENST00000229265 IDH1O75874 414 aaKnown RBP12.52□□□□□ -0.41
CDCA3-201ENST00000229265 CPA1P15085 419 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 ZNF445P59923 1031 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 CAP1Q01518 475 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 PRKG1Q13976 671 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 RALYLQ86SE5 291 aaKnown RBP12.52□□□□□ -0.41
CDCA3-201ENST00000229265 RASAL3Q86YV0 1011 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 RNF41Q9H4P4 317 aaPredicted RBP12.52□□□□□ -0.41
CDCA3-201ENST00000229265 LRP2BPQ9P2M1 347 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 FAM205AQ6ZU69 1335 aa12.52□□□□□ -0.41
CDCA3-201ENST00000229265 MYO5AQ9Y4I1 1855 aaKnown RBP12.52□□□□□ -0.41
CDCA3-201ENST00000229265 HIBADHP31937 336 aaKnown RBP12.51□□□□□ -0.41
CDCA3-201ENST00000229265 GJA5P36382 358 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 LIFRP42702 1097 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 RCAN1P53805 252 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 CACNB3P54284 484 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 MKRN3Q13064 507 aaKnown RBP12.51□□□□□ -0.41
CDCA3-201ENST00000229265 PKP1Q13835 747 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 CFAP100Q494V2 611 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 NAA16Q6N069 864 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-201ENST00000229265 VPS37DQ86XT2 251 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 IFNL3Q8IZI9 196 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 DCPSQ96C86 337 aaKnown RBP12.51□□□□□ -0.41
CDCA3-201ENST00000229265 CLMNQ96JQ2 1002 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 SCAND2PQ9GZW5 306 aaPredicted RBP12.51□□□□□ -0.41
CDCA3-201ENST00000229265 ANAPC4Q9UJX5 808 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 MTMR6Q9Y217 621 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 SALL1Q9NSC2 1324 aa12.51□□□□□ -0.41
CDCA3-201ENST00000229265 FOXP2O15409 715 aa12.5□□□□□ -0.41
CDCA3-201ENST00000229265 PDIA3P30101 505 aaKnown RBP12.5□□□□□ -0.41
CDCA3-201ENST00000229265 KIF23Q02241 960 aaPredicted RBP12.5□□□□□ -0.41
CDCA3-201ENST00000229265 STOX1Q6ZVD7 989 aa12.5□□□□□ -0.41
CDCA3-201ENST00000229265 MB21D2Q8IYB1 491 aaPredicted RBP12.5□□□□□ -0.41
CDCA3-201ENST00000229265 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
CDCA3-201ENST00000229265 BRF1Q92994 677 aa12.5□□□□□ -0.41
CDCA3-201ENST00000229265 ELP1O95163 1332 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 SPDYE2BA6NHP3 402 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 APPP05067 770 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 SLC10A3P09131 477 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 SPDYE6P0CI01 402 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 UBE2HP62256 183 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-201ENST00000229265 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
CDCA3-201ENST00000229265 RGMBQ6NW40 437 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
CDCA3-201ENST00000229265 NOL8Q76FK4 1167 aaKnown RBP12.49□□□□□ -0.41
CDCA3-201ENST00000229265 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 MAGEB6Q8N7X4 407 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 FAM184AQ8NB25 1140 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 TEPSINQ96N21 525 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 CSRNP1Q96S65 589 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 TDRD3Q9H7E2 651 aaKnown RBP12.49□□□□□ -0.41
CDCA3-201ENST00000229265 CFAP45Q9UL16 551 aa12.49□□□□□ -0.41
CDCA3-201ENST00000229265 ZSWIM8A7E2V4 1837 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 LAMB1P07942 1786 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 PITPNM2Q9BZ72 1349 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 GSG1L2A8MUP6 293 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 LARGE1O95461 756 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 MFSD14BQ5SR56 506 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 PI16Q6UXB8 463 aa12.48□□□□□ -0.41
CDCA3-201ENST00000229265 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms