RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 SRGAP1Q7Z6B7 1085 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 CAGE1Q8TC20 777 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 KIFC2Q96AC6 838 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 C19orf44Q9H6X5 657 aa16.34■□□□□ 0.21
SFXN3-201ENST00000224807 CTAGE15A4D2H0 777 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 CTAGE9A4FU28 777 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 CTAGE8P0CG41 777 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 RFX5P48382 616 aaPredicted RBP16.33■□□□□ 0.21
SFXN3-201ENST00000224807 CTAGE6Q86UF2 777 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 CTAGE4Q8IX94 777 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 KCND1Q9NSA2 647 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 AKAP2Q9Y2D5 859 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 TBX22Q9Y458 520 aa16.33■□□□□ 0.21
SFXN3-201ENST00000224807 NOM1Q5C9Z4 860 aaKnown RBP16.33■□□□□ 0.2
SFXN3-201ENST00000224807 HELBQ8NG08 1087 aaPredicted RBP16.33■□□□□ 0.2
SFXN3-201ENST00000224807 DSCC1Q9BVC3 393 aa16.33■□□□□ 0.2
SFXN3-201ENST00000224807 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
SFXN3-201ENST00000224807 FAM205CA6NFA0 338 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 CTDSPL2Q05D32 466 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.32■□□□□ 0.2
SFXN3-201ENST00000224807 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 RSRC2Q7L4I2 434 aaKnown RBP16.32■□□□□ 0.2
SFXN3-201ENST00000224807 EXOC4Q96A65 974 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 MTMR7Q9Y216 660 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 NCAPD2Q15021 1401 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 SALL1Q9NSC2 1324 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 CCDC151A5D8V7 595 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 LRRIQ3A6PVS8 624 aaPredicted RBP16.32■□□□□ 0.2
SFXN3-201ENST00000224807 SNAP23O00161 211 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 TMEM67Q5HYA8 995 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.32■□□□□ 0.2
SFXN3-201ENST00000224807 CABP5Q9NP86 173 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 HELLSQ9NRZ9 838 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 STX10O60499 249 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 CHRNA2Q15822 529 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 BEND6Q5SZJ8 279 aaPredicted RBP16.32■□□□□ 0.2
SFXN3-201ENST00000224807 ATL3Q6DD88 541 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 SYNE4Q8N205 404 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 TAB2Q9NYJ8 693 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 PCDHB6Q9Y5E3 794 aa16.32■□□□□ 0.2
SFXN3-201ENST00000224807 IFIT3O14879 490 aaKnown RBP16.31■□□□□ 0.2
SFXN3-201ENST00000224807 N4BP3O15049 544 aa16.31■□□□□ 0.2
SFXN3-201ENST00000224807 DIS3L2Q8IYB7 885 aaKnown RBP16.31■□□□□ 0.2
SFXN3-201ENST00000224807 ZBTB43O43298 467 aa16.31■□□□□ 0.2
SFXN3-201ENST00000224807 KRI1Q8N9T8 703 aaKnown RBP16.31■□□□□ 0.2
SFXN3-201ENST00000224807 EPSTI1Q96J88 318 aa16.31■□□□□ 0.2
SFXN3-201ENST00000224807 PLIN2Q99541 437 aa16.31■□□□□ 0.2
SFXN3-201ENST00000224807 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
SFXN3-201ENST00000224807 FXR1P51114 621 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFXN3-201ENST00000224807 CABLES1Q8TDN4 633 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 SMARCC1Q92922 1105 aaPredicted RBP16.3■□□□□ 0.2
SFXN3-201ENST00000224807 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 BPIFA3Q9BQP9 254 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 CDC23Q9UJX2 597 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 JRKLQ9Y4A0 524 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 SAMM50Q9Y512 469 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 ADGRG1Q9Y653 693 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 RNF40O75150 1001 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 SAFBQ15424 915 aaKnown RBP eCLIP16.3■□□□□ 0.2
SFXN3-201ENST00000224807 SLC4A8Q2Y0W8 1093 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 TBC1D10CQ8IV04 446 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 FAM107BQ9H098 131 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 NFAT5O94916 1531 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 PRDM1O75626 825 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 GCP02774 474 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 GPTP24298 496 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 CCT5P48643 541 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 SF3A3Q12874 501 aaKnown RBP eCLIP16.3■□□□□ 0.21e-7■■■□□ 16.1
SFXN3-201ENST00000224807 MUM1L1Q5H9M0 696 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 CTR9Q6PD62 1173 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 RASSF8Q8NHQ8 419 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 OXER1Q8TDS5 423 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 DDX17Q92841 729 aaKnown RBP16.3■□□□□ 0.2
SFXN3-201ENST00000224807 FAM89AQ96GI7 184 aa16.3■□□□□ 0.2
SFXN3-201ENST00000224807 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
SFXN3-201ENST00000224807 PALLDQ8WX93 1383 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 XAGE2Q96GT9 111 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 TUBE1Q9UJT0 475 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 IQSEC3Q9UPP2 1182 aaPredicted RBP16.29■□□□□ 0.2
SFXN3-201ENST00000224807 CTNND2Q9UQB3 1225 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
SFXN3-201ENST00000224807 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
SFXN3-201ENST00000224807 FAM170AA1A519 330 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 ANGEL1Q9UNK9 670 aaKnown RBP16.28■□□□□ 0.2
SFXN3-201ENST00000224807 SLC12A7Q9Y666 1083 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 GOLGA6L9A6NEM1 432 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 ZPR1O75312 459 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 MED15Q96RN5 788 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 RFX7Q2KHR2 1363 aa16.28■□□□□ 0.2
SFXN3-201ENST00000224807 BRD3Q15059 726 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 APOA5Q6Q788 366 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 LRRC31Q6UY01 552 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 CHP1Q99653 195 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 CSRNP2Q9H175 543 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 DEF6Q9H4E7 631 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 MACROD2A1Z1Q3 448 aa16.27■□□□□ 0.2
SFXN3-201ENST00000224807 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms