RNA–Protein interactions for RNA: ENST00000222330.7

GSK3A-201, Transcript of glycogen synthase kinase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSK3A, Length 2,188 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3A-201ENST00000222330 POLR3DP05423 398 aaPredicted RBP28.23■■■□□ 2.11
GSK3A-201ENST00000222330 CRKP46108 304 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 FAM47AQ5JRC9 791 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 APOA5Q6Q788 366 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 CCDC144CPQ8IYA2 1237 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 SMARCC2Q8TAQ2 1214 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 MTMR6Q9Y217 621 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 NAV1Q8NEY1 1877 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 COL4A5P29400 1685 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 PTPDC1A2A3K4 754 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 SLC3A2P08195 630 aaKnown RBP28.23■■■□□ 2.11
GSK3A-201ENST00000222330 ZSCAN22P10073 491 aaPredicted RBP28.23■■■□□ 2.11
GSK3A-201ENST00000222330 LIFRP42702 1097 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 PICALMQ13492 652 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 LLPHQ9BRT6 129 aaKnown RBP28.23■■■□□ 2.11
GSK3A-201ENST00000222330 UBAC1Q9BSL1 405 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 USP40Q9NVE5 1235 aa28.23■■■□□ 2.11
GSK3A-201ENST00000222330 ZNF646O15015 1829 aaPredicted RBP28.23■■■□□ 2.11
GSK3A-201ENST00000222330 VPS37CA5D8V6 355 aaPredicted RBP28.22■■■□□ 2.11
GSK3A-201ENST00000222330 WTAPQ15007 396 aa28.22■■■□□ 2.11
GSK3A-201ENST00000222330 SART3Q15020 963 aaKnown RBP28.22■■■□□ 2.11
GSK3A-201ENST00000222330 APOBEC3HQ6NTF7 200 aaKnown RBP28.22■■■□□ 2.11
GSK3A-201ENST00000222330 HHIPL2Q6UWX4 724 aa28.22■■■□□ 2.11
GSK3A-201ENST00000222330 SGMS1Q86VZ5 419 aa28.22■■■□□ 2.11
GSK3A-201ENST00000222330 MICU3Q86XE3 530 aa28.22■■■□□ 2.11
GSK3A-201ENST00000222330 RAD17O75943 681 aa28.21■■■□□ 2.11
GSK3A-201ENST00000222330 MCTP1Q6DN14 999 aa28.21■■■□□ 2.11
GSK3A-201ENST00000222330 ORC4O43929 436 aa28.21■■■□□ 2.11
GSK3A-201ENST00000222330 FKBP1AP62942 108 aaKnown RBP28.21■■■□□ 2.11
GSK3A-201ENST00000222330 PDE4BQ07343 736 aa28.21■■■□□ 2.11
GSK3A-201ENST00000222330 SLC44A5Q8NCS7 719 aa28.21■■■□□ 2.11
GSK3A-201ENST00000222330 TNKSO95271 1327 aa28.2■■■□□ 2.11
GSK3A-201ENST00000222330 ERICH2A1L162 156 aa28.2■■■□□ 2.11
GSK3A-201ENST00000222330 CCDC69A6NI79 296 aa28.2■■■□□ 2.11
GSK3A-201ENST00000222330 PCP11498 1178 aaKnown RBP28.2■■■□□ 2.11
GSK3A-201ENST00000222330 CDC42EP5Q6NZY7 148 aa28.2■■■□□ 2.11
GSK3A-201ENST00000222330 SLC12A7Q9Y666 1083 aa28.2■■■□□ 2.11
GSK3A-201ENST00000222330 NMT2O60551 498 aa28.2■■■□□ 2.1
GSK3A-201ENST00000222330 ADD1P35611 737 aaKnown RBP28.2■■■□□ 2.1
GSK3A-201ENST00000222330 RBM5P52756 815 aaKnown RBP eCLIP28.2■■■□□ 2.1
GSK3A-201ENST00000222330 AMOTL1Q8IY63 956 aa28.2■■■□□ 2.1
GSK3A-201ENST00000222330 DDX4Q9NQI0 724 aaKnown RBP28.2■■■□□ 2.1
GSK3A-201ENST00000222330 ZBTB43O43298 467 aa28.19■■■□□ 2.1
GSK3A-201ENST00000222330 METAP2P50579 478 aaKnown RBP eCLIP28.19■■■□□ 2.12e-6■□□□□ 9
GSK3A-201ENST00000222330 SEC23AQ15436 765 aa28.19■■■□□ 2.1
GSK3A-201ENST00000222330 SOGA3Q5TF21 947 aa28.19■■■□□ 2.1
GSK3A-201ENST00000222330 ZSCAN10Q96SZ4 725 aaPredicted RBP28.19■■■□□ 2.1
GSK3A-201ENST00000222330 WDHD1O75717 1129 aaPredicted RBP28.18■■■□□ 2.1
GSK3A-201ENST00000222330 CDC27P30260 824 aa28.18■■■□□ 2.1
GSK3A-201ENST00000222330 FOSBP53539 338 aa28.18■■■□□ 2.1
GSK3A-201ENST00000222330 CDC37L1Q7L3B6 337 aa28.18■■■□□ 2.1
GSK3A-201ENST00000222330 ENAHQ8N8S7 591 aaPredicted RBP28.18■■■□□ 2.1
GSK3A-201ENST00000222330 FAM184AQ8NB25 1140 aa28.18■■■□□ 2.1
GSK3A-201ENST00000222330 MYH1P12882 1939 aa28.18■■■□□ 2.1
GSK3A-201ENST00000222330 DDX11L8A8MPP1 907 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 PDCP20941 246 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 ZDHHC15Q96MV8 337 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 CPLX1O14810 134 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 F13A1P00488 732 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 FDPSP14324 419 aaKnown RBP28.17■■■□□ 2.1
GSK3A-201ENST00000222330 MKNK2Q9HBH9 465 aa28.17■■■□□ 2.1
GSK3A-201ENST00000222330 FER1L6Q2WGJ9 1857 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 PSMD14O00487 310 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 IARSP41252 1262 aaKnown RBP28.16■■■□□ 2.1
GSK3A-201ENST00000222330 CACNB3P54284 484 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 IQCA1Q86XH1 822 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 MTA3Q9BTC8 594 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 TSPY2A6NKD2 308 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 DHX16O60231 1041 aaKnown RBP28.16■■■□□ 2.1
GSK3A-201ENST00000222330 FERMT3Q86UX7 667 aa28.16■■■□□ 2.1
GSK3A-201ENST00000222330 FAM217BQ9NTX9 383 aaPredicted RBP28.16■■■□□ 2.1
GSK3A-201ENST00000222330 FOCADQ5VW36 1801 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 GOLGA8AA7E2F4 631 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 NFKBIEO00221 500 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 HMGN5P82970 282 aaKnown RBP28.15■■■□□ 2.1
GSK3A-201ENST00000222330 TFAP4Q01664 338 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 NFIAQ12857 509 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 MRIQ9BWK5 157 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 ROBO3Q96MS0 1386 aa28.15■■■□□ 2.1
GSK3A-201ENST00000222330 SYNE3Q6ZMZ3 975 aa28.14■■■□□ 2.1
GSK3A-201ENST00000222330 TMTC2Q8N394 836 aa28.14■■■□□ 2.1
GSK3A-201ENST00000222330 TAOK3Q9H2K8 898 aa28.14■■■□□ 2.1
GSK3A-201ENST00000222330 ZBTB12Q9Y330 459 aaPredicted RBP28.14■■■□□ 2.1
GSK3A-201ENST00000222330 RASSF7Q02833 373 aa28.14■■■□□ 2.09
GSK3A-201ENST00000222330 TCHHQ07283 1943 aa28.14■■■□□ 2.09
GSK3A-201ENST00000222330 ARFGEF1Q9Y6D6 1849 aa28.14■■■□□ 2.09
GSK3A-201ENST00000222330 DDX60LQ5H9U9 1706 aaKnown RBP28.13■■■□□ 2.09
GSK3A-201ENST00000222330 IFIT1BQ5T764 474 aaKnown RBP28.13■■■□□ 2.09
GSK3A-201ENST00000222330 NIM1KQ8IY84 436 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 ZNF654Q8IZM8 581 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 NUP133Q8WUM0 1156 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 CHMP4CQ96CF2 233 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 ZNRF3Q9ULT6 936 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 HDLBPQ00341 1268 aaKnown RBP28.13■■■□□ 2.09
GSK3A-201ENST00000222330 RSBN1LQ6PCB5 846 aaPredicted RBP28.13■■■□□ 2.09
GSK3A-201ENST00000222330 SERPINA10Q9UK55 444 aa28.13■■■□□ 2.09
GSK3A-201ENST00000222330 GOLGA6L22H0YM25 854 aa28.12■■■□□ 2.09
GSK3A-201ENST00000222330 CDK8P49336 464 aa28.12■■■□□ 2.09
GSK3A-201ENST00000222330 ZFPM1Q8IX07 1006 aa28.12■■■□□ 2.09
GSK3A-201ENST00000222330 VPS33BQ9H267 617 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms