RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 TMEM232C9JQI7 657 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 SFPQP23246 707 aaKnown RBP eCLIP16.84■□□□□ 0.29
CNOT3-201ENST00000221232 PPARAQ07869 468 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 ALX1Q15699 326 aa16.84■□□□□ 0.29
CNOT3-201ENST00000221232 CTIFO43310 598 aaKnown RBP16.83■□□□□ 0.29
CNOT3-201ENST00000221232 PPP6R2O75170 966 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 ERFEQ4G0M1 354 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 RESP18Q5W5W9 173 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 CNNM2Q9H8M5 875 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 VPS54Q9P1Q0 977 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 HPSEQ9Y251 543 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 SPEF2Q9C093 1822 aa16.83■□□□□ 0.29
CNOT3-201ENST00000221232 NEMFO60524 1076 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 TRMT44Q8IYL2 757 aaKnown RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 ZNF654Q8IZM8 581 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 KRI1Q8N9T8 703 aaKnown RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 FANCBQ8NB91 859 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 SERTAD1Q9UHV2 236 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 PAXBP1Q9Y5B6 917 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 SLIT2O94813 1529 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 MMP1P03956 469 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 IFNAR1P17181 557 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 E4F1Q66K89 784 aaPredicted RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 KRBA2Q6ZNG9 492 aa16.83■□□□□ 0.28
CNOT3-201ENST00000221232 CRACR2BQ8N4Y2 399 aaPredicted RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
CNOT3-201ENST00000221232 MAGEB6P1A0A0J9YX57 407 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 BMP6P22004 513 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 OLFM4Q6UX06 510 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 NTSR2O95665 410 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 CASP1P29466 404 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 GSDMDP57764 484 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 SYT10Q6XYQ8 523 aa16.82■□□□□ 0.28
CNOT3-201ENST00000221232 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
CNOT3-201ENST00000221232 CUTAO60888 179 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 IGSF3O75054 1194 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 STAG1Q8WVM7 1258 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 TMX1Q9H3N1 280 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 TNKSO95271 1327 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 KDM4FA0A1W2PPD8 638 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 TFCP2L1Q9NZI6 479 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 TUBE1Q9UJT0 475 aa16.81■□□□□ 0.28
CNOT3-201ENST00000221232 V9GY48 417 aaPredicted RBP16.81■□□□□ 0.28
CNOT3-201ENST00000221232 ATRNO75882 1429 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 KLRK1P26718 216 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 AKAP17AQ02040 695 aaKnown RBP16.8■□□□□ 0.28
CNOT3-201ENST00000221232 MYL5Q02045 173 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 NOM1Q5C9Z4 860 aaKnown RBP16.8■□□□□ 0.28
CNOT3-201ENST00000221232 EARS2Q5JPH6 523 aaKnown RBP16.8■□□□□ 0.28
CNOT3-201ENST00000221232 NYAP1Q6ZVC0 841 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 HOMER1Q86YM7 354 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 ANKRD7Q92527 254 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 BPIFA3Q9BQP9 254 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 OSBPL5Q9H0X9 879 aaPredicted RBP16.8■□□□□ 0.28
CNOT3-201ENST00000221232 NMT2O60551 498 aa16.8■□□□□ 0.28
CNOT3-201ENST00000221232 COBLO75128 1261 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 PLEKHA8P1O95397 391 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 CDK11BP21127 795 aaKnown RBP16.79■□□□□ 0.28
CNOT3-201ENST00000221232 AFMP43652 599 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 ANKRD18AQ8IVF6 992 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 WASF1Q92558 559 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 STAMQ92783 540 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 TIGD1Q96MW7 591 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 MYH15Q9Y2K3 1946 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 CELF1Q92879 486 aaKnown RBP16.79■□□□□ 0.28
CNOT3-201ENST00000221232 SHISA4Q96DD7 197 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 PPP1R13BQ96KQ4 1090 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 CSRNP2Q9H175 543 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.79■□□□□ 0.28
CNOT3-201ENST00000221232 MTMR7Q9Y216 660 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 GNAT2P19087 354 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 PARP10Q53GL7 1025 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 FAM47AQ5JRC9 791 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 KLHL10Q6JEL2 608 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 KIF18AQ8NI77 898 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 IMPACTQ9P2X3 320 aa16.79■□□□□ 0.28
CNOT3-201ENST00000221232 DEXIO95424 95 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 FMR1Q06787 632 aaKnown RBP eCLIP16.78■□□□□ 0.28
CNOT3-201ENST00000221232 DHX58Q96C10 678 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 EPSTI1Q96J88 318 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 FBXO2Q9UK22 296 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-201ENST00000221232 MAN1B1Q9UKM7 699 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 ITGB4P16144 1822 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 WNT7AO00755 349 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 POSTNQ15063 836 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 ENAHQ8N8S7 591 aaPredicted RBP16.78■□□□□ 0.28
CNOT3-201ENST00000221232 ESR2Q92731 530 aa16.78■□□□□ 0.28
CNOT3-201ENST00000221232 DISP2A7MBM2 1401 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 USP17L12C9JPN9 530 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 USP17L21D6R901 530 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 STX17P56962 302 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 ZNF174Q15697 407 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 PTF1AQ7RTS3 328 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 SLC51AQ86UW1 340 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 LRRN4CLQ8ND94 238 aa16.77■□□□□ 0.28
CNOT3-201ENST00000221232 CDC5LQ99459 802 aaKnown RBP16.77■□□□□ 0.28
CNOT3-201ENST00000221232 RNF41Q9H4P4 317 aaPredicted RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms