RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 SRGAP1Q7Z6B7 1085 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 MYCT1Q8N699 235 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 XAGE2Q96GT9 111 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 POLKQ9UBT6 870 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 PNMA2Q9UL42 364 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 FAM184BQ9ULE4 1060 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 SOS1Q07889 1333 aaPredicted RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 EIF4G3O43432 1585 aaKnown RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 TESPA1A2RU30 521 aaPredicted RBP11.78□□□□□ -0.52
TRPS1-201ENST00000220888 NUCB1Q02818 461 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 PLCB4Q15147 1175 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 MFSD14BQ5SR56 506 aa11.78□□□□□ -0.52
TRPS1-201ENST00000220888 IRX5P78411 483 aaPredicted RBP11.77□□□□□ -0.52
TRPS1-201ENST00000220888 ITIH3Q06033 890 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 PPP2R5CQ13362 524 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 RSPH3Q86UC2 560 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 DNAJC10Q8IXB1 793 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 NAP1L3Q99457 506 aaPredicted RBP11.77□□□□□ -0.52
TRPS1-201ENST00000220888 KCNK9Q9NPC2 374 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 LRFN2Q9ULH4 789 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 TCP10L2B9ZVM9 353 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 EXOC3O60645 756 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 ALAS1P13196 640 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 TIMM10P62072 90 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.52
TRPS1-201ENST00000220888 RILPL1Q5EBL4 403 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 VPS52Q8N1B4 723 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 ORAI2Q96SN7 254 aa11.77□□□□□ -0.52
TRPS1-201ENST00000220888 NOC4LQ9BVI4 516 aaKnown RBP11.77□□□□□ -0.52
TRPS1-201ENST00000220888 V9GY48 417 aaPredicted RBP11.77□□□□□ -0.52
TRPS1-201ENST00000220888 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 ESYT2A0FGR8 921 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 TLDC2A0PJX2 215 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 IPO4Q8TEX9 1081 aaKnown RBP11.77□□□□□ -0.53
TRPS1-201ENST00000220888 AP5M1Q9H0R1 490 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 DACT1Q9NYF0 836 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 TMOD1P28289 359 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 KCTD2Q14681 263 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 ZNF365Q70YC5 407 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 DAAM2Q86T65 1068 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 SNX29Q8TEQ0 813 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 LRWD1Q9UFC0 647 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 CNPY2Q9Y2B0 182 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 TOP2BQ02880 1626 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 MROH5Q6ZUA9 1318 aa11.77□□□□□ -0.53
TRPS1-201ENST00000220888 A1BGP04217 495 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 SYT1P21579 422 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ANKS4BQ8N8V4 417 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 TBC1D2Q9BYX2 928 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 GUCA1BQ9UMX6 200 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 TACC3Q9Y6A5 838 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ZEB2O60315 1214 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 NOL3O60936 208 aaKnown RBP11.76□□□□□ -0.53
TRPS1-201ENST00000220888 KIF11P52732 1056 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 MIER3Q7Z3K6 550 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ATRIPQ8WXE1 791 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 CLSTN2Q9H4D0 955 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ATP2B4P23634 1241 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 HSPA1LP34931 641 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 MUM1L1Q5H9M0 696 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ELMSAN1Q6PJG2 1045 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 ARMC9Q7Z3E5 817 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 PPANQ9NQ55 473 aaKnown RBP11.76□□□□□ -0.53
TRPS1-201ENST00000220888 TNNI1P19237 187 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 HDAC1Q13547 482 aaPredicted RBP11.76□□□□□ -0.53
TRPS1-201ENST00000220888 GAS7O60861 476 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 F13A1P00488 732 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 OSBPP22059 807 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 HERC4Q5GLZ8 1057 aaPredicted RBP11.76□□□□□ -0.53
TRPS1-201ENST00000220888 APPBP2Q92624 585 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 TSGA10Q9BZW7 698 aa11.76□□□□□ -0.53
TRPS1-201ENST00000220888 CAPN9O14815 690 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 ERCC6LQ2NKX8 1250 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 RPS6KC1Q96S38 1066 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 DNAI1Q9UI46 699 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 SKILP12757 684 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 CAPZA3Q96KX2 299 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 XRCC6P12956 609 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRPS1-201ENST00000220888 SLC12A2P55011 1212 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 SND1Q7KZF4 910 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRPS1-201ENST00000220888 CCDC26Q8TAB7 109 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 XPAP23025 273 aaPredicted RBP11.75□□□□□ -0.53
TRPS1-201ENST00000220888 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 KIAA0825Q8IV33 1275 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 IWS1Q96ST2 819 aa11.75□□□□□ -0.53
TRPS1-201ENST00000220888 SATB1Q01826 763 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 TBC1D8BQ0IIM8 1120 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 UBL4BQ8N7F7 174 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 SPATA5Q8NB90 893 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 IFT81Q8WYA0 676 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 DNAJC25Q9H1X3 360 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 MRPL11Q9Y3B7 192 aaKnown RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 PAXBP1Q9Y5B6 917 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 STK25O00506 426 aa11.74□□□□□ -0.53
TRPS1-201ENST00000220888 IFRD2Q12894 506 aaPredicted RBP11.74□□□□□ -0.53
TRPS1-201ENST00000220888 ASIC2Q16515 512 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms