RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 CCDC114Q96M63 670 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 TTC14Q96N46 770 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 PPP1R9BQ96SB3 815 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 NACA2Q9H009 215 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 AGTPBP1Q9UPW5 1226 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
SMPD3-201ENST00000219334 FAM160A1Q05DH4 1040 aa21.2■□□□□ 0.98
SMPD3-201ENST00000219334 SLU7O95391 586 aaKnown RBP21.19■□□□□ 0.98
SMPD3-201ENST00000219334 CTSWP56202 376 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 LIN9Q5TKA1 542 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 SRRTQ9BXP5 876 aaKnown RBP21.19■□□□□ 0.98
SMPD3-201ENST00000219334 CSRNP2Q9H175 543 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 ARPP21Q9UBL0 812 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-201ENST00000219334 TRPC5Q9UL62 973 aaPredicted RBP21.19■□□□□ 0.98
SMPD3-201ENST00000219334 OPA1O60313 960 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 KRT9P35527 623 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 KCNG1Q9UIX4 513 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 NLGN1Q8N2Q7 840 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 PRIMPOLQ96LW4 560 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 CFAP58Q5T655 872 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 NLRX1Q86UT6 975 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 CTNND2Q9UQB3 1225 aa21.19■□□□□ 0.98
SMPD3-201ENST00000219334 RRP9O43818 475 aaKnown RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 PABPC4Q13310 644 aaKnown RBP eCLIP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 KCNH3Q9ULD8 1083 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 SPOPO43791 374 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 SPOUT1Q5T280 376 aaKnown RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 PAGR1Q9BTK6 254 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 TSGA10Q9BZW7 698 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 SERPINA10Q9UK55 444 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 ARID4AP29374 1257 aaPredicted RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 TNNC1P63316 161 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 GLG1Q92896 1179 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 ZNF830Q96NB3 372 aaPredicted RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 ODF2LQ9ULJ1 636 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 DAPK3O43293 454 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 HERC4Q5GLZ8 1057 aaPredicted RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 PROCA1Q8NCQ7 364 aaPredicted RBP21.18■□□□□ 0.98
SMPD3-201ENST00000219334 GIMAP7Q8NHV1 300 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 CAPZA3Q96KX2 299 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 FAM227BQ96M60 508 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 FAM204AQ9H8W3 233 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 GNPTABQ3T906 1256 aa21.18■□□□□ 0.98
SMPD3-201ENST00000219334 SULF1Q8IWU6 871 aa21.17■□□□□ 0.98
SMPD3-201ENST00000219334 QTRT2Q9H974 415 aaKnown RBP21.17■□□□□ 0.98
SMPD3-201ENST00000219334 LZTFL1Q9NQ48 299 aa21.17■□□□□ 0.98
SMPD3-201ENST00000219334 DCPSQ96C86 337 aaKnown RBP21.17■□□□□ 0.98
SMPD3-201ENST00000219334 ZBTB16Q05516 673 aa21.17■□□□□ 0.98
SMPD3-201ENST00000219334 RASA3Q14644 834 aa21.17■□□□□ 0.98
SMPD3-201ENST00000219334 CALCRLQ16602 461 aa21.17■□□□□ 0.98
SMPD3-201ENST00000219334 NCOA5Q9HCD5 579 aaKnown RBP21.17■□□□□ 0.98
SMPD3-201ENST00000219334 MYCT1Q8N699 235 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 WDR62O43379 1518 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 KARSQ15046 597 aaKnown RBP21.16■□□□□ 0.98
SMPD3-201ENST00000219334 ZNF569Q5MCW4 686 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 CCDC25Q86WR0 208 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 CSGALNACT2Q8N6G5 542 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 E7EVH7 732 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 PHKG2P15735 406 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 TUBB4BP68371 445 aa21.16■□□□□ 0.98
SMPD3-201ENST00000219334 REXO1Q8N1G1 1221 aaKnown RBP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 HAUS7Q99871 368 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 NEURL1BA8MQ27 555 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 TCOF1Q13428 1488 aaKnown RBP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 CUTAO60888 179 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 GTF2F1P35269 517 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 MYL10Q9BUA6 226 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 ADAMTS12P58397 1594 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 FAM47CQ5HY64 1035 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 SMC6Q96SB8 1091 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 AKR1B15C9JRZ8 316 aaPredicted RBP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 EXOC3O60645 756 aa21.15■□□□□ 0.98
SMPD3-201ENST00000219334 ERCC5P28715 1186 aaPredicted RBP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 NOLC1Q14978 699 aaKnown RBP eCLIP21.15■□□□□ 0.98
SMPD3-201ENST00000219334 VAV2P52735 878 aa21.14■□□□□ 0.98
SMPD3-201ENST00000219334 CCDC122Q5T0U0 273 aa21.14■□□□□ 0.98
SMPD3-201ENST00000219334 OTUD6AQ7L8S5 288 aa21.14■□□□□ 0.98
SMPD3-201ENST00000219334 DDX23Q9BUQ8 820 aaKnown RBP21.14■□□□□ 0.98
SMPD3-201ENST00000219334 MLXIPQ9HAP2 919 aa21.14■□□□□ 0.98
SMPD3-201ENST00000219334 MAP7D1Q3KQU3 841 aa21.14■□□□□ 0.97
SMPD3-201ENST00000219334 NAP1L3Q99457 506 aaPredicted RBP21.14■□□□□ 0.97
SMPD3-201ENST00000219334 MCM6Q14566 821 aa21.14■□□□□ 0.97
SMPD3-201ENST00000219334 SGSM2O43147 1006 aa21.14■□□□□ 0.97
SMPD3-201ENST00000219334 KRT19P08727 400 aa21.14■□□□□ 0.97
SMPD3-201ENST00000219334 FAM47AQ5JRC9 791 aa21.14■□□□□ 0.97
SMPD3-201ENST00000219334 PPARAQ07869 468 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 KIAA0825Q8IV33 1275 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 ARHGEF12Q9NZN5 1544 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 SH3BP5O60239 455 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 TRIM14Q14142 442 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 SELENOSQ9BQE4 189 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 SNX14Q9Y5W7 946 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 POLR2DO15514 142 aaKnown RBP21.13■□□□□ 0.97
SMPD3-201ENST00000219334 ATP2C2O75185 946 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 OTUD7AQ8TE49 926 aaPredicted RBP21.13■□□□□ 0.97
SMPD3-201ENST00000219334 VPS16Q9H269 839 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 ATP7AQ04656 1500 aa21.13■□□□□ 0.97
SMPD3-201ENST00000219334 ZBTB24O43167 697 aaPredicted RBP21.12■□□□□ 0.97
SMPD3-201ENST00000219334 STK10O94804 968 aaKnown RBP21.12■□□□□ 0.97
SMPD3-201ENST00000219334 CD19P15391 556 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms