RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ZNF274Q96GC6 653 aaPredicted RBP11.6□□□□□ -0.55
USP11-201ENST00000218348 SLC26A6Q9BXS9 759 aa11.6□□□□□ -0.55
USP11-201ENST00000218348 TTC12Q9H892 705 aaPredicted RBP11.6□□□□□ -0.55
USP11-201ENST00000218348 ANKIB1Q9P2G1 1089 aa11.6□□□□□ -0.55
USP11-201ENST00000218348 ANGEL1Q9UNK9 670 aaKnown RBP11.6□□□□□ -0.55
USP11-201ENST00000218348 DOCK2Q92608 1830 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 SBF1O95248 1867 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 GOLGA8AA7E2F4 631 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 CAVIN4Q5BKX8 364 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 MFSD6Q6ZSS7 791 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 MAP7D2Q96T17 732 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 KIF28PB7ZC32 967 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 RANBP6O60518 1105 aaKnown RBP11.59□□□□□ -0.55
USP11-201ENST00000218348 RPS8P62241 208 aaKnown RBP11.59□□□□□ -0.55
USP11-201ENST00000218348 ANO6Q4KMQ2 910 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 DNAJC25Q9H1X3 360 aa11.59□□□□□ -0.55
USP11-201ENST00000218348 AATFQ9NY61 560 aaKnown RBP eCLIP11.59□□□□□ -0.55
USP11-201ENST00000218348 AP5Z1O43299 807 aa11.58□□□□□ -0.55
USP11-201ENST00000218348 ALG1Q9BT22 464 aa11.58□□□□□ -0.55
USP11-201ENST00000218348 GOLPH3LQ9H4A5 285 aa11.58□□□□□ -0.55
USP11-201ENST00000218348 CCDC69A6NI79 296 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 ZBTB43O43298 467 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 PRDX5P30044 214 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 IRX5P78411 483 aaPredicted RBP11.58□□□□□ -0.56
USP11-201ENST00000218348 TYRO3Q06418 890 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 STK38Q15208 465 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 FSIP1Q8NA03 581 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 ZNF526Q8TF50 670 aaPredicted RBP11.58□□□□□ -0.56
USP11-201ENST00000218348 FAM84BQ96KN1 310 aaPredicted RBP11.58□□□□□ -0.56
USP11-201ENST00000218348 KIF3AQ9Y496 699 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 SLC12A7Q9Y666 1083 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 DICER1Q9UPY3 1922 aaKnown RBP11.58□□□□□ -0.56
USP11-201ENST00000218348 BIN1O00499 593 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 CCDC192P0DO97 292 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 APOA5Q6Q788 366 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 CFAP45Q9UL16 551 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 KCNJ14Q9UNX9 436 aa11.58□□□□□ -0.56
USP11-201ENST00000218348 CHD4Q14839 1912 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 MAGEB6P1A0A0J9YX57 407 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 GUCY1A2P33402 732 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 SPECC1Q5M775 1068 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 AGXT2Q9BYV1 514 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 NACAP1Q9BZK3 213 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 ZSCAN16Q9H4T2 348 aaPredicted RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 GNL3LQ9NVN8 582 aaKnown RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 SH2B2O14492 632 aaPredicted RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 SASS6Q6UVJ0 657 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 SYNE3Q6ZMZ3 975 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 ATF5Q9Y2D1 282 aaPredicted RBP11.57□□□□□ -0.56
USP11-201ENST00000218348 PARP3Q9Y6F1 533 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 LAMA4Q16363 1823 aa11.57□□□□□ -0.56
USP11-201ENST00000218348 DHX16O60231 1041 aaKnown RBP11.56□□□□□ -0.56
USP11-201ENST00000218348 NMT2O60551 498 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 KIF20AO95235 890 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 CYP2D6P10635 497 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 AKNAD1Q5T1N1 836 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 CCDC73Q6ZRK6 1079 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 DRC7Q8IY82 874 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 SDF4Q9BRK5 362 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 IARSP41252 1262 aaKnown RBP11.56□□□□□ -0.56
USP11-201ENST00000218348 FAM47AQ5JRC9 791 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 CRAMP1Q96RY5 1269 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
USP11-201ENST00000218348 CLGNO14967 610 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 FBXO18Q8NFZ0 1043 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 IGDCC4Q8TDY8 1250 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 PCDHA7Q9UN72 937 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 MRVI1Q9Y6F6 885 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 MYH13Q9UKX3 1938 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 USP17L12C9JPN9 530 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 USP17L21D6R901 530 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 STYK1Q6J9G0 422 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 ZNF384Q8TF68 577 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 UBAC1Q9BSL1 405 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 BSDC1Q9NW68 430 aaPredicted RBP11.55□□□□□ -0.56
USP11-201ENST00000218348 CD2APQ9Y5K6 639 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 UQCRHLA0A096LP55 91 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 ERICH2A1L162 156 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 UQCRHP07919 91 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 HIBADHP31937 336 aaKnown RBP11.55□□□□□ -0.56
USP11-201ENST00000218348 PSEN1P49768 467 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 PPARAQ07869 468 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 WTAPQ15007 396 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 DIXDC1Q155Q3 683 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 KRT40Q6A162 431 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 PDLIM2Q96JY6 352 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 ZNF396Q96N95 335 aaPredicted RBP11.55□□□□□ -0.56
USP11-201ENST00000218348 SCN9AQ15858 1988 aa11.55□□□□□ -0.56
USP11-201ENST00000218348 KINO60870 393 aaKnown RBP11.54□□□□□ -0.56
USP11-201ENST00000218348 ST5P78524 1137 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 ZNF512BQ96KM6 892 aaPredicted RBP11.54□□□□□ -0.56
USP11-201ENST00000218348 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
USP11-201ENST00000218348 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP11-201ENST00000218348 SALL1Q9NSC2 1324 aa11.54□□□□□ -0.56
USP11-201ENST00000218348 LETM1O95202 739 aaPredicted RBP11.54□□□□□ -0.56
USP11-201ENST00000218348 MECOMQ03112 1051 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms