RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 STK11IPQ8N1F8 1099 aa27.83■■■□□ 2.04
SNTA1-201ENST00000217381 CNNM3Q8NE01 707 aa27.83■■■□□ 2.04
SNTA1-201ENST00000217381 SLC4A4Q9Y6R1 1079 aa27.83■■■□□ 2.04
SNTA1-201ENST00000217381 TDO2P48775 406 aa27.82■■■□□ 2.04
SNTA1-201ENST00000217381 TOB1P50616 345 aaPredicted RBP27.82■■■□□ 2.04
SNTA1-201ENST00000217381 RRP12Q5JTH9 1297 aaKnown RBP27.82■■■□□ 2.04
SNTA1-201ENST00000217381 NACAP1Q9BZK3 213 aa27.82■■■□□ 2.04
SNTA1-201ENST00000217381 ATP6V1AP38606 617 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 RTN1Q16799 776 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 DIS3L2Q8IYB7 885 aaKnown RBP27.81■■■□□ 2.04
SNTA1-201ENST00000217381 DPF2Q92785 391 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 FEZ1Q99689 392 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 ZKSCAN3Q9BRR0 538 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 WTAPQ15007 396 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 ELOA2Q8IYF1 753 aaPredicted RBP27.81■■■□□ 2.04
SNTA1-201ENST00000217381 PCDHA5Q9Y5H7 936 aa27.81■■■□□ 2.04
SNTA1-201ENST00000217381 UBASH3AP57075 661 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 CCDC152Q4G0S7 254 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 PARP10Q53GL7 1025 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 ACSBG1Q96GR2 724 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 KCNJ14Q9UNX9 436 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 LOC102724428A0A0B4J2F2 783 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 SIK1P57059 783 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 MDM2Q00987 491 aaPredicted RBP27.8■■■□□ 2.04
SNTA1-201ENST00000217381 SART3Q15020 963 aaKnown RBP27.8■■■□□ 2.04
SNTA1-201ENST00000217381 SAFBQ15424 915 aaKnown RBP eCLIP27.8■■■□□ 2.04
SNTA1-201ENST00000217381 TRIM22Q8IYM9 498 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 MTA3Q9BTC8 594 aa27.8■■■□□ 2.04
SNTA1-201ENST00000217381 SPATA31A1Q5TZJ5 1347 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 CBFA2T2O43439 604 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 NRDCO43847 1150 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 ZSCAN20P17040 1043 aaPredicted RBP27.79■■■□□ 2.04
SNTA1-201ENST00000217381 OLFM4Q6UX06 510 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 FOXP1Q9H334 677 aaPredicted RBP27.79■■■□□ 2.04
SNTA1-201ENST00000217381 TOMM22Q9NS69 142 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 A0A1B0GUL6 1792 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 ERO1AQ96HE7 468 aa27.79■■■□□ 2.04
SNTA1-201ENST00000217381 FOXN1O15353 648 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 MYO1BO43795 1136 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 SERPINC1P01008 464 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 BMP6P22004 513 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 SPECC1Q5M775 1068 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 FBXO2Q9UK22 296 aaPredicted RBP27.78■■■□□ 2.04
SNTA1-201ENST00000217381 DEXIO95424 95 aa27.78■■■□□ 2.04
SNTA1-201ENST00000217381 CRACR2BQ8N4Y2 399 aaPredicted RBP27.78■■■□□ 2.04
SNTA1-201ENST00000217381 MARCH10Q8NA82 808 aaPredicted RBP27.78■■■□□ 2.04
SNTA1-201ENST00000217381 NIP7Q9Y221 180 aaKnown RBP eCLIP27.78■■■□□ 2.04
SNTA1-201ENST00000217381 PTPREP23469 700 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 RCAN1P53805 252 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 GRIN1Q05586 938 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 DDB1Q16531 1140 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 RILPL1Q5EBL4 403 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 MIGA1Q8NAN2 632 aa27.77■■■□□ 2.04
SNTA1-201ENST00000217381 CDCA7Q9BWT1 371 aaPredicted RBP27.77■■■□□ 2.04
SNTA1-201ENST00000217381 ERICH2A1L162 156 aa27.76■■■□□ 2.04
SNTA1-201ENST00000217381 IGHMBP2P38935 993 aaKnown RBP27.76■■■□□ 2.04
SNTA1-201ENST00000217381 CHRNDQ07001 517 aa27.76■■■□□ 2.04
SNTA1-201ENST00000217381 PDE4BQ07343 736 aa27.76■■■□□ 2.04
SNTA1-201ENST00000217381 BCL11BQ9C0K0 894 aaPredicted RBP27.76■■■□□ 2.04
SNTA1-201ENST00000217381 PRDM4Q9UKN5 801 aa27.76■■■□□ 2.04
SNTA1-201ENST00000217381 UBAP1LF5GYI3 381 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 SLU7O95391 586 aaKnown RBP27.76■■■□□ 2.03
SNTA1-201ENST00000217381 CFAP100Q494V2 611 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 VSTM4Q8IW00 320 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 TMTC2Q8N394 836 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 RNF41Q9H4P4 317 aaPredicted RBP27.76■■■□□ 2.03
SNTA1-201ENST00000217381 L2HGDHQ9H9P8 463 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 FANCLQ9NW38 375 aa27.76■■■□□ 2.03
SNTA1-201ENST00000217381 CMTR1Q8N1G2 835 aaKnown RBP27.75■■■□□ 2.03
SNTA1-201ENST00000217381 A0A0G2JS52 829 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 CCDC196A0A1B0GTZ2 297 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 ADGRA1Q86SQ6 560 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 ZNF654Q8IZM8 581 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 CCDC82Q8N4S0 544 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 TMX1Q9H3N1 280 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 LRP2BPQ9P2M1 347 aa27.75■■■□□ 2.03
SNTA1-201ENST00000217381 CASZ1Q86V15 1759 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 PPARAQ07869 468 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 NR5A1Q13285 461 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 OGFRQ9NZT2 677 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.74■■■□□ 2.03
SNTA1-201ENST00000217381 HOOK1Q9UJC3 728 aaKnown RBP27.74■■■□□ 2.03
SNTA1-201ENST00000217381 V9GYY5 206 aaPredicted RBP27.74■■■□□ 2.03
SNTA1-201ENST00000217381 COL5A3P25940 1745 aaPredicted RBP27.74■■■□□ 2.03
SNTA1-201ENST00000217381 POSTNQ15063 836 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 SYT10Q6XYQ8 523 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 FANCBQ8NB91 859 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 MAN1B1Q9UKM7 699 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 PCDHB6Q9Y5E3 794 aa27.74■■■□□ 2.03
SNTA1-201ENST00000217381 TUBB4AP04350 444 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 DMTNQ08495 405 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 NT5DC1Q5TFE4 455 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 COL1A1P02452 1464 aaPredicted RBP27.73■■■□□ 2.03
SNTA1-201ENST00000217381 TMEM232C9JQI7 657 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 ZNF579Q8NAF0 562 aaKnown RBP27.73■■■□□ 2.03
SNTA1-201ENST00000217381 NUP133Q8WUM0 1156 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 INTS13Q9NVM9 706 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 THRAP3Q9Y2W1 955 aaKnown RBP27.73■■■□□ 2.03
SNTA1-201ENST00000217381 ZNF804BA4D1E1 1349 aa27.73■■■□□ 2.03
SNTA1-201ENST00000217381 POLR2DO15514 142 aaKnown RBP27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms