RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 KRBA2Q6ZNG9 492 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 KIAA1328Q86T90 577 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 PLA2G4DQ86XP0 818 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
CSTF1-201ENST00000217109 DEF6Q9H4E7 631 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 IMPACTQ9P2X3 320 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 SEC63Q9UGP8 760 aaKnown RBP11.11□□□□□ -0.63
CSTF1-201ENST00000217109 IDEP14735 1019 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 IL6STP40189 918 aaPredicted RBP11.11□□□□□ -0.63
CSTF1-201ENST00000217109 STAT6P42226 847 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 RIPOR2Q9Y4F9 1068 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 NEDD4P46934 1319 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 RTL9Q8NET4 1388 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 UBR1Q8IWV7 1749 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 USP27XA6NNY8 438 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 DYNLL1P63167 89 aaKnown RBP11.11□□□□□ -0.63
CSTF1-201ENST00000217109 C8orf37Q96NL8 207 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 TNS3Q68CZ2 1445 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 RFC4P35249 363 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 ERCC6LQ2NKX8 1250 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 CCDC70Q6NSX1 233 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 KRT222Q8N1A0 295 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 PALLDQ8WX93 1383 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 VPS16Q9H269 839 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 BLZF1Q9H2G9 400 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 MPHOSPH10O00566 681 aaKnown RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 ZNF397Q8NF99 534 aaPredicted RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 ERO1AQ96HE7 468 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 TRIM47Q96LD4 638 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 CARD6Q9BX69 1037 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 F8W031 263 aaPredicted RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 GNPATO15228 680 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 BAG3O95817 575 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 KRT18P05783 430 aaKnown RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 TNNT3P45378 269 aaPredicted RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 CASP7P55210 303 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 PDE4CQ08493 712 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 IQCB1Q15051 598 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 IQUBQ8NA54 791 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 SMARCC1Q92922 1105 aaPredicted RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 DESI2Q9BSY9 194 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 SPTLC3Q9NUV7 552 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 SAP30BPQ9UHR5 308 aaKnown RBP11.1□□□□□ -0.63
CSTF1-201ENST00000217109 SLIT1O75093 1534 aa11.1□□□□□ -0.63
CSTF1-201ENST00000217109 EPS15P42566 896 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 ANTXR2P58335 489 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 ZSCAN29Q8IWY8 852 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 IGSF22Q8N9C0 903 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 RPGRQ92834 1020 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 BMP15O95972 392 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 RBM5P52756 815 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 TTC38Q5R3I4 469 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 MLKLQ8NB16 471 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 PUF60Q9UHX1 559 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 PCDHB6Q9Y5E3 794 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 RFX7Q2KHR2 1363 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CALM1P0DP23 149 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CALM2P0DP24 149 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CALM3P0DP25 149 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CYP19A1P11511 503 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 ENOX2Q16206 610 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CCDC178Q5BJE1 867 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 UBE2Q2LH0YL09 131 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CCDC175P0C221 793 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 TRIM28Q13263 835 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 NOM1Q5C9Z4 860 aaKnown RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 SMYD4Q8IYR2 804 aaPredicted RBP11.09□□□□□ -0.63
CSTF1-201ENST00000217109 EEF2KMTQ96G04 330 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 CTNND2Q9UQB3 1225 aa11.09□□□□□ -0.63
CSTF1-201ENST00000217109 GOLGA6L9A6NEM1 432 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 SPTY2D1Q68D10 685 aaPredicted RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 DHX40Q8IX18 779 aaKnown RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 CCDC102AQ96A19 550 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 ZSCAN10Q96SZ4 725 aaPredicted RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 CSRNP2Q9H175 543 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 AKR1B15C9JRZ8 316 aaPredicted RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 IFNAR1P17181 557 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 CDC25BP30305 580 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 DNA2P51530 1060 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 RPS8P62241 208 aaKnown RBP11.08□□□□□ -0.64
CSTF1-201ENST00000217109 JAKMIP3Q5VZ66 844 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 TRERF1Q96PN7 1200 aa11.08□□□□□ -0.64
CSTF1-201ENST00000217109 FOXN1O15353 648 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 PPP6R2O75170 966 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 CDC25AP30304 524 aa11.07□□□□□ -0.64
CSTF1-201ENST00000217109 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms