RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 IQCA1Q86XH1 822 aa34.51■■■■□ 3.12
PABPN1-201ENST00000216727 FANCBQ8NB91 859 aa34.51■■■■□ 3.12
PABPN1-201ENST00000216727 GPR101Q96P66 508 aaPredicted RBP34.51■■■■□ 3.12
PABPN1-201ENST00000216727 MYH2Q9UKX2 1941 aa34.51■■■■□ 3.11
PABPN1-201ENST00000216727 LRRC37AA6NMS7 1700 aa34.51■■■■□ 3.11
PABPN1-201ENST00000216727 POLR3DP05423 398 aaPredicted RBP34.5■■■■□ 3.11
PABPN1-201ENST00000216727 ENAHQ8N8S7 591 aaPredicted RBP34.5■■■■□ 3.11
PABPN1-201ENST00000216727 SLC26A6Q9BXS9 759 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 NRXN2Q9P2S2 1712 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 APBA3O96018 575 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 PPP4CP60510 307 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 LINC00301Q8NCQ3 95 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 FLAD1Q8NFF5 587 aa34.5■■■■□ 3.11
PABPN1-201ENST00000216727 COL23A1Q86Y22 540 aaPredicted RBP34.49■■■■□ 3.11
PABPN1-201ENST00000216727 TRIM22Q8IYM9 498 aa34.49■■■■□ 3.11
PABPN1-201ENST00000216727 TBC1D16Q8TBP0 767 aa34.49■■■■□ 3.11
PABPN1-201ENST00000216727 LDHCP07864 332 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 NT5C2P49902 561 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 TRIM29Q14134 588 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 KCNG4Q8TDN1 519 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 MKRN1Q9UHC7 482 aaKnown RBP34.48■■■■□ 3.11
PABPN1-201ENST00000216727 LTBP1Q14766 1721 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 NBPF11Q86T75 865 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 SP8Q8IXZ3 490 aa34.48■■■■□ 3.11
PABPN1-201ENST00000216727 BAG3O95817 575 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 ME1P48163 572 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 CAMK4Q16566 473 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 CERS3Q8IU89 383 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 CCAR1Q8IX12 1150 aaKnown RBP34.47■■■■□ 3.11
PABPN1-201ENST00000216727 CRACR2BQ8N4Y2 399 aaPredicted RBP34.47■■■■□ 3.11
PABPN1-201ENST00000216727 POLLQ9UGP5 575 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 DLEC1Q9Y238 1755 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 ANKRD31Q8N7Z5 1873 aa34.47■■■■□ 3.11
PABPN1-201ENST00000216727 PRDM1O75626 825 aa34.46■■■■□ 3.11
PABPN1-201ENST00000216727 U2AF2P26368 475 aaKnown RBP eCLIP34.46■■■■□ 3.114e-24■■□□□ 13.9
PABPN1-201ENST00000216727 GRIK5Q16478 980 aa34.45■■■■□ 3.11
PABPN1-201ENST00000216727 IFIT1BQ5T764 474 aaKnown RBP34.45■■■■□ 3.11
PABPN1-201ENST00000216727 ADALQ6DHV7 355 aa34.45■■■■□ 3.11
PABPN1-201ENST00000216727 CLIC4Q9Y696 253 aa34.45■■■■□ 3.11
PABPN1-201ENST00000216727 A0A1W2PQ27 194 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 A0A1W2PQ64 194 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 A0A1W2PQD8 194 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 PDE4BQ07343 736 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 STK38Q15208 465 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 NUP133Q8WUM0 1156 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 PCDHA7Q9UN72 937 aa34.45■■■■□ 3.1
PABPN1-201ENST00000216727 MROH7-TTC4A0A0A0MT08 1334 aa34.44■■■■□ 3.1
PABPN1-201ENST00000216727 PPEF1O14829 653 aaPredicted RBP34.44■■■■□ 3.1
PABPN1-201ENST00000216727 DEXIO95424 95 aa34.44■■■■□ 3.1
PABPN1-201ENST00000216727 CCDC73Q6ZRK6 1079 aa34.44■■■■□ 3.1
PABPN1-201ENST00000216727 MCM9Q9NXL9 1143 aa34.44■■■■□ 3.1
PABPN1-201ENST00000216727 HS1BP3Q53T59 392 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 ANO1Q5XXA6 986 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 CATIPQ7Z7H3 387 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 NOL10Q9BSC4 688 aaKnown RBP34.43■■■■□ 3.1
PABPN1-201ENST00000216727 RTN4Q9NQC3 1192 aaKnown RBP34.43■■■■□ 3.1
PABPN1-201ENST00000216727 CALM1P0DP23 149 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 CALM2P0DP24 149 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 CALM3P0DP25 149 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 DIXDC1Q155Q3 683 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 ENGASEQ8NFI3 743 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 ATP6V0A2Q9Y487 856 aa34.43■■■■□ 3.1
PABPN1-201ENST00000216727 SPTLC2O15270 562 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 CYP2D6P10635 497 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 FAM160A1Q05DH4 1040 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 SNW1Q13573 536 aaKnown RBP34.42■■■■□ 3.1
PABPN1-201ENST00000216727 SH3RF3Q8TEJ3 882 aaPredicted RBP34.42■■■■□ 3.1
PABPN1-201ENST00000216727 GOLPH3LQ9H4A5 285 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 SRGNP10124 158 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 USP5P45974 858 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 EVX2Q03828 476 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 TYRO3Q06418 890 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 C12orf60Q5U649 245 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 TBC1D22AQ8WUA7 517 aa34.42■■■■□ 3.1
PABPN1-201ENST00000216727 RNF26Q9BY78 433 aaPredicted RBP34.42■■■■□ 3.1
PABPN1-201ENST00000216727 CTAGE5O15320 804 aa34.41■■■■□ 3.1
PABPN1-201ENST00000216727 RTFDC1Q9BY42 306 aaPredicted RBP34.41■■■■□ 3.1
PABPN1-201ENST00000216727 RBM28Q9NW13 759 aaKnown RBP34.41■■■■□ 3.1
PABPN1-201ENST00000216727 UBE2Q2LH0YL09 131 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 DDAH1O94760 285 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 NPR1P16066 1061 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 GUCY1A2P33402 732 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 TROAPQ12815 778 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 GNL2Q13823 731 aaKnown RBP34.4■■■■□ 3.1
PABPN1-201ENST00000216727 SF3A1Q15459 793 aaKnown RBP34.4■■■■□ 3.1
PABPN1-201ENST00000216727 CKAP2LQ8IYA6 745 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 GNL3Q9BVP2 549 aaKnown RBP eCLIP34.4■■■■□ 3.1
PABPN1-201ENST00000216727 ROBO3Q96MS0 1386 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 USP17L8P0C7I0 530 aa34.4■■■■□ 3.1
PABPN1-201ENST00000216727 MRPS27Q92552 414 aaKnown RBP34.4■■■■□ 3.1
PABPN1-201ENST00000216727 C6orf229H3BNL8 230 aa34.39■■■■□ 3.1
PABPN1-201ENST00000216727 FSIP1Q8NA03 581 aa34.39■■■■□ 3.1
PABPN1-201ENST00000216727 RRAGDQ9NQL2 400 aaPredicted RBP34.39■■■■□ 3.1
PABPN1-201ENST00000216727 FAM205AQ6ZU69 1335 aa34.39■■■■□ 3.1
PABPN1-201ENST00000216727 ESPNB1AK53 854 aa34.38■■■■□ 3.09
PABPN1-201ENST00000216727 MMP1P03956 469 aa34.38■■■■□ 3.09
PABPN1-201ENST00000216727 RXRBP28702 533 aa34.38■■■■□ 3.09
PABPN1-201ENST00000216727 SLC39A14Q15043 492 aa34.38■■■■□ 3.09
PABPN1-201ENST00000216727 FAM163AQ96GL9 167 aaPredicted RBP34.38■■■■□ 3.09
PABPN1-201ENST00000216727 MRVI1Q9Y6F6 885 aa34.38■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms